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14_0929_02_30cm_scaffold_446

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Displaying items 1-30 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_02_30cm_scaffold_446_1
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..179
DNA (177bp) protein (59aa)
UPF0276 protein WQE_40134 n=1 Tax=Burkholderia terrae BS001 RepID=I5CH91_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
14_0929_02_30cm_scaffold_446_2
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163..921
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V539_9BRAD
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
14_0929_02_30cm_scaffold_446_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1012..1305)
DNA (294bp) protein (98aa)
id=3449074 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_02_30cm_scaffold_446_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1306..1500)
DNA (195bp) protein (65aa)
Putative uncharacterized protein id=4695013 bin=GWC2_Methylomirabilis_70_16 species=Bacillus sp. SG-1 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_02_30cm_scaffold_446_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1514..1702)
DNA (189bp) protein (63aa)
Peroxiredoxin id=2306567 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
14_0929_02_30cm_scaffold_446_6
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1919..2167)
DNA (249bp) protein (83aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SV08_9BRAD
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:CCD98035.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
alkyl hydroperoxide reductase
14_0929_02_30cm_scaffold_446_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2237..2836
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00036EEF10
ECF subfamily RNA polymerase sigma-70 factor
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_446_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2833..3063
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFX3_CORCM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_446_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3060..4307
DNA (1248bp) protein (416aa)
Uncharacterized protein id=4181317 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_02_30cm_scaffold_446_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4326..5000)
DNA (675bp) protein (225aa)
hypothetical protein id=14429315 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_446_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

5108..5911
DNA (804bp) protein (268aa)
glucose-1-dehydrogenase n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034AC165 rbh
dehydrogenase rbh
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0929_02_30cm_scaffold_446_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5948..7210
DNA (1263bp) protein (421aa)
Major facilitator superfamily MFS_1 id=4712290 bin=GWC2_Methylomirabilis_70_16 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily transporter
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_02_30cm_scaffold_446_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7207..7902
DNA (696bp) protein (232aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Putative Phosphoglycolate phosphatase id=4930053 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_446_14
unknown

Not on your lists

7899..8021
DNA (123bp) protein (41aa)

This feature has no annotations

14_0929_02_30cm_scaffold_446_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8091..8729)
DNA (639bp) protein (213aa)
RNA-binding protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000308ED7A
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_446_16
unknown

Not on your lists

comp(8854..8976)
DNA (123bp) protein (41aa)

This feature has no annotations

14_0929_02_30cm_scaffold_446_17
unknown

Not on your lists

comp(9028..9228)
DNA (201bp) protein (67aa)

This feature has no annotations

14_0929_02_30cm_scaffold_446_18
unknown

Not on your lists

9338..9796
DNA (459bp) protein (153aa)

This feature has no annotations

14_0929_02_30cm_scaffold_446_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9797..11398)
DNA (1602bp) protein (534aa)
Guanylate cyclase (Fragment) id=4492891 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium W5-15b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_446_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11460..11729)
DNA (270bp) protein (90aa)
hypothetical protein id=14626253 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_02_30cm_scaffold_446_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11758..13155)
DNA (1398bp) protein (466aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT7_SYNFM
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_446_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13157..13837)
DNA (681bp) protein (227aa)
PhoB family transcriptional regulator n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI000377B06F
two component transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_446_23
unknown

Not on your lists

comp(13845..14621)
DNA (777bp) protein (259aa)

This feature has no annotations

14_0929_02_30cm_scaffold_446_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14638..15960)
DNA (1323bp) protein (441aa)
Serine protease do-like (EC:3.4.21.-)
Putative Serine protease do-like n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMR6_9BACT
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_446_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16147..16656
DNA (510bp) protein (170aa)
hypothetical protein id=14429806 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_446_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16756..17544)
DNA (789bp) protein (263aa)
Phenazine biosynthesis protein PhzF family id=1884744 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_446_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17562..18146
DNA (585bp) protein (195aa)
Methyltransferase type 11 id=1884749 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_446_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18222..18419
DNA (198bp) protein (66aa)
Putative uncharacterized protein id=1884751 bin=GWA2_Methylomirabilis_73_35 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_446_29
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18423..19091
DNA (669bp) protein (223aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1)
Bll6773 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89FC8_BRADU
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
14_0929_02_30cm_scaffold_446_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19088..20002
DNA (915bp) protein (305aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=17009939 bin=RBG_16_Aminicenantes_66_30 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
DNA polymerase LigD ligase subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 65 in total

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