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14_0929_02_40cm_scaffold_4460

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_02_40cm_scaffold_4460_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..1230)
DNA (1230bp) protein (410aa)
id=2937131 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_02_40cm_scaffold_4460_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1230..1934)
DNA (705bp) protein (235aa)
Tetratricopeptide TPR_4 id=4092321 bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_40cm_scaffold_4460_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1949..2272
DNA (324bp) protein (108aa)
Regulatory protein, FmdB family id=4092319 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_4460_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2208..3038)
DNA (831bp) protein (277aa)
Putative uncharacterized protein id=4092238 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_40cm_scaffold_4460_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3058..4056)
DNA (999bp) protein (333aa)
Polyprenyl synthetase id=4092237 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
poluprenyl synthetase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_40cm_scaffold_4460_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4066..4812)
DNA (747bp) protein (249aa)
Putative uncharacterized protein id=4092236 bin=GWA2_Methylomirabilis_73_35 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_4460_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4840..5622)
DNA (783bp) protein (261aa)
Uncharacterized protein id=4576787 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_40cm_scaffold_4460_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5649..7238)
DNA (1590bp) protein (530aa)
Methylmalonyl-CoA mutase, N-terminal domain id=4092234 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Sbm; methylmalonyl-CoA mutase N-terminal domain-containing protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_40cm_scaffold_4460_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7235..8785)
DNA (1551bp) protein (517aa)
pccB; propionyl-CoA carboxylase subunit beta (EC:6.4.1.3)
Putative propionyl-CoA carboxylase beta chain id=4092233 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_40cm_scaffold_4460_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8841..9233
DNA (393bp) protein (131aa)
hypothetical protein id=4092232 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_40cm_scaffold_4460_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9226..9543
DNA (318bp) protein (106aa)
hypothetical protein id=14627456 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_40cm_scaffold_4460_12
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9536..10135
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMW5_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK18767.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
14_0929_02_40cm_scaffold_4460_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10283..10861
DNA (579bp) protein (193aa)
Uncharacterized protein id=4183757 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_40cm_scaffold_4460_14
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(10864..11343)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LEP8_9BACT
hypothetical protein
Tax=RBG_16_Zixibacteria_40_9_curated
14_0929_02_40cm_scaffold_4460_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11384..12757)
DNA (1374bp) protein (458aa)
lpD; dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (EC:1.8.1.4) id=14627457 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dihydrolipoamide dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_4460_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12901..13143)
DNA (243bp) protein (81aa)
pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (EC:2.3.1.12) id=14627458 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (EC:2.3.1.12)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 16 items

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