name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
14_0929_05_40cm_scaffold_108_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(2..199)
|
tufB; Elongation factor Tu (EF-Tu) id=14627327 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
tuf; elongation factor Tu
Tax=CSP1_6_Rokubacteria
|
|
14_0929_05_40cm_scaffold_108_trna_4
unknown
|
Not on your lists |
comp(243..315)
|
transferRNA Thr
|
|
14_0929_05_40cm_scaffold_108_trna_3
unknown
|
Not on your lists |
comp(407..478)
|
transferRNA Gly
|
|
14_0929_05_40cm_scaffold_108_trna_2
unknown
|
Not on your lists |
comp(509..591)
|
transferRNA Tyr
|
|
14_0929_05_40cm_scaffold_108_trna_1
unknown
|
Not on your lists |
comp(647..718)
|
transferRNA Thr
|
|
14_0929_05_40cm_scaffold_108_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(736..1554)
|
rRNA methyltransferase id=4675081 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TrmH family RNA methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
14_0929_05_40cm_scaffold_108_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(1503..2894)
|
Cysteine--tRNA ligase id=4675082 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysS; cysteinyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(2891..3367)
|
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase id=4675083 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
14_0929_05_40cm_scaffold_108_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(3364..4041)
|
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=4675084 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(4034..5044)
|
hypothetical protein id=14625946 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
|
|
14_0929_05_40cm_scaffold_108_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(5041..6405)
|
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA id=3836394 bin=GWF2_Methylomirabilis_70_14 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
|
|
14_0929_05_40cm_scaffold_108_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(6406..7629)
|
ABC transporter substrate-binding protein id=14625944 bin=bin7_NC10_sister species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Mce family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
14_0929_05_40cm_scaffold_108_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(7622..8374)
|
ABC transporter; K02065 putative ABC transport system ATP-binding protein id=14625943 bin=bin7_NC10_sister species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(8379..9146)
|
yrbE; toluene ABC transporter subunit membrane protein id=14625942 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
yrbE; toluene ABC transporter subunit membrane protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
14_0929_05_40cm_scaffold_108_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9150..9653)
|
Conserved uncharacterized protein id=4831888 bin=GWC2_Methylomirabilis_70_24 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9658..10290)
|
hisI; histidine biosynthesis bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein hisIE id=4246274 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(10287..11129)
|
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF id=3836382 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(11123..11842)
|
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase id=14625938 bin=bin7_NC10_sister species=Acinetobacter nectaris genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
14_0929_05_40cm_scaffold_108_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(11839..12465)
|
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] id=14625937 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
imidazole glycerol phosphate synthase subunit hisH
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(12462..13067)
|
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=14625936 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hisB; imidazoleglycerol-phosphate dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(13064..14383)
|
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase id=4246279 bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(14380..15075)
|
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17) id=14625934 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
14_0929_05_40cm_scaffold_108_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(15072..16325)
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4980435 bin=GWA2_Methylomirabilis_73_35 species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
14_0929_05_40cm_scaffold_108_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(16329..17222)
|
Release factor glutamine methyltransferase id=4980434 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
|
|
14_0929_05_40cm_scaffold_108_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(17219..18292)
|
Peptide chain release factor 1 id=4980433 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
prfA; peptide chain release factor 1
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
14_0929_05_40cm_scaffold_108_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(18331..18546)
|
50S ribosomal protein L31 id=4246284 bin=GWC2_Methylomirabilis_70_16 species=Faecalibacterium prausnitzii genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LSU ribosomal protein L31P
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
14_0929_05_40cm_scaffold_108_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(18651..19979)
|
rho; transcription termination factor Rho id=14625929 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
transcription termination factor Rho
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
|
14_0929_05_40cm_scaffold_108_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(20123..21193)
|
PpiC-type peptidyl-prolyl cis-trans isomerase id=4980430 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=GWA2_Rokubacteria_73_35_curated
|
|
14_0929_05_40cm_scaffold_108_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(21190..24390)
|
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-)
Transcription-repair coupling factor id=4980429 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
|
|
14_0929_05_40cm_scaffold_108_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(24446..25054)
|
Redox-sensing transcriptional repressor rex id=4980428 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rex; redox-sensing transcriptional repressor rex
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|