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14_1009_16_30cm_scaffold_1889

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_30cm_scaffold_1889_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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670..1530
DNA (861bp) protein (287aa)
GTPase Era n=1 Tax=uncultured Gemmatimonadales bacterium HF4000_15H13 RepID=E7C887_9BACT
GTP-binding protein Era-like-protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1889_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1527..1706
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI00037F8F7F
protein of unknown function DUF343
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1889_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1687..2724
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX65_9BACT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1889_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2724..3545
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38617.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_16_30cm_scaffold_1889_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3636..4613
DNA (978bp) protein (326aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX64_9BACT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1889_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5160..5456
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q9_GEMAT
MJ0042 family finger-like protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1889_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5577..6575
DNA (999bp) protein (333aa)
Protein chain release factor B n=1 Tax=uncultured bacterium W5-51b RepID=H9BX62_9BACT
peptide chain release factor 2
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_16_30cm_scaffold_1889_8

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6577..8049
DNA (1473bp) protein (491aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1130999 species="Bacteria; environmental samples.;" source="uncultured bacterium W5-51b.;"
Lysine--tRNA ligase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX61_9BACT
Lysyl-tRNA synthetase
14_1009_16_30cm_scaffold_1889_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8046..9380
DNA (1335bp) protein (445aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX60_9BACT
MacB-like periplasmic core domain protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_16_30cm_scaffold_1889_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9377..10078
DNA (702bp) protein (234aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=uncultured bacterium W5-51b RepID=H9BX59_9BACT
ABC transporter related protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_16_30cm_scaffold_1889_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10078..10569
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX58_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_16_30cm_scaffold_1889_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10566..11639
DNA (1074bp) protein (358aa)
ATP:guanido phosphotransferase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX57_9BACT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1889_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11653..14133
DNA (2481bp) protein (827aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R6_GEMAT
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_1889_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14130..16511
DNA (2382bp) protein (794aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
outer membrane protein assembly complex, YaeT protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1889_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16535..17083
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0770_41L09 RepID=E7C7T5_9BACT
outer membrane chaperone Skp (OmpH)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_1889_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17100..18155
DNA (1056bp) protein (352aa)
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_1889_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18139..19434
DNA (1296bp) protein (432aa)
lpxC_fabZ; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase (EC:3.5.1.- 4.2.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT
14_1009_16_30cm_scaffold_1889_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19431..20198
DNA (768bp) protein (256aa)
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT
14_1009_16_30cm_scaffold_1889_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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20195..21172
DNA (978bp) protein (326aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_30cm_scaffold_1889_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21169..22284
DNA (1116bp) protein (372aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_1889_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22281..22904
DNA (624bp) protein (208aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Bacteria RepID=E7C459_9BACT
protein of unknown function DUF374
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_1889_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22901..23950
DNA (1050bp) protein (350aa)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_1889_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23947..25257
DNA (1311bp) protein (437aa)
Glutamate dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLI2_CHLTF
Glu/Leu/Phe/Val dehydrogenase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_1889_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25257..25682
DNA (426bp) protein (142aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX96_SORCE
50S rRNA methyltransferase
14_1009_16_30cm_scaffold_1889_25
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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25708..26223
DNA (516bp) protein (172aa)
Protein HLRTI_002811 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PL94_9EURY
AMMECR1 domain protein
Protein HLRTI_002811 {ECO:0000256|HAMAP-Rule:MF_00645}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
14_1009_16_30cm_scaffold_1889_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26270..27700
DNA (1431bp) protein (477aa)
UPF0747 protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E8_9BACT
protein of unknown function UCP012535
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_1889_27
unknown

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27711..27977
DNA (267bp) protein (89aa)

This feature has no annotations

14_1009_16_30cm_scaffold_1889_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27980..29110
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YHS9_9DELT
integral membrane protein MviN
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 28 items

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