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14_1009_16_30cm_scaffold_3178

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_30cm_scaffold_3178_1
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

1..2187
DNA (2187bp) protein (729aa)
ATP-dependent DNA helicase RecG n=2 Tax=Chloroflexus RepID=A9WCU5_CHLAA
ATP-dependent DNA helicase RecG
Tax=RBG_16_Chloroflexi_57_9_curated
14_1009_16_30cm_scaffold_3178_2
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

2187..3719
DNA (1533bp) protein (511aa)
serine protease (EC:3.4.21.107)
MucD id=3240418 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_13_Nitrospirae_41_22_curated
14_1009_16_30cm_scaffold_3178_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3864..4535)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BC832
coenzyme PQQ synthesis protein C family protein
Coenzyme PQQ synthesis protein C family protein {ECO:0000313|EMBL:ACO32432.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
14_1009_16_30cm_scaffold_3178_4
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4633..7956)
DNA (3324bp) protein (1108aa)
Maltose alpha-D-glucosyltransferase {ECO:0000313|EMBL:GAN31608.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Trehalose synthase id=3727119 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
alpha-amylase
14_1009_16_30cm_scaffold_3178_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8109..8786
DNA (678bp) protein (226aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ECF subfamily RNA polymerase sigma-24 factor
14_1009_16_30cm_scaffold_3178_6
unknown

Not on your lists

8776..9012
DNA (237bp) protein (79aa)

This feature has no annotations

14_1009_16_30cm_scaffold_3178_7
unknown

Not on your lists

comp(9033..9524)
DNA (492bp) protein (164aa)

This feature has no annotations

14_1009_16_30cm_scaffold_3178_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9526..10077)
DNA (552bp) protein (184aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP2_9BACT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ATP-dependent Clp protease adapter protein clpS
14_1009_16_30cm_scaffold_3178_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10532..11812)
DNA (1281bp) protein (427aa)
NADH dehydrogenase, FAD-containing subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG27_SINAD
NADH dehydrogenase, FAD-containing subunit
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:AGA27621.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
14_1009_16_30cm_scaffold_3178_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12699..12986
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNM6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58566.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
14_1009_16_30cm_scaffold_3178_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12992..13327)
DNA (336bp) protein (112aa)
Histidine triad (HIT) protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D974_9BACT
Histidine triad (HIT) protein {ECO:0000313|EMBL:EDY16977.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
histidine triad protein
14_1009_16_30cm_scaffold_3178_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13437..13997)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D973_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16976.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_1009_16_30cm_scaffold_3178_13
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13984..14535)
DNA (552bp) protein (184aa)
NrdR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E16
ATP-cone domain-containing protein
Tax=GWF2_Lentisphaerae_57_35_curated
14_1009_16_30cm_scaffold_3178_14
R_SM2F11_45_18, SM2F11, Bacteria

Not on your lists

14883..15842
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Vibrio breoganii RepID=UPI000366A845
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_45_18_curated
14_1009_16_30cm_scaffold_3178_15
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15883..17016)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MXJ7_9CYAN
Alpha/beta hydrolase {ECO:0000313|EMBL:KGQ20788.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
14_1009_16_30cm_scaffold_3178_16
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17118..20015)
DNA (2898bp) protein (966aa)
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
DNA topoisomerase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1K8_AZOSB
14_1009_16_30cm_scaffold_3178_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20169..21269)
DNA (1101bp) protein (367aa)
DNA protecting protein DprA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D957_9BACT
DNA protecting protein DprA {ECO:0000313|EMBL:EDY17102.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA protecting protein DprA
14_1009_16_30cm_scaffold_3178_18
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(21266..21655)
DNA (390bp) protein (130aa)
PilT domain-containing protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZ84_9BACT
pilus biogenesis protein
Pilus biogenesis protein {ECO:0000313|EMBL:AHF89953.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
14_1009_16_30cm_scaffold_3178_19
unknown

Not on your lists

comp(21682..21909)
DNA (228bp) protein (76aa)

This feature has no annotations

14_1009_16_30cm_scaffold_3178_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(21964..22407)
DNA (444bp) protein (148aa)
single-stranded DNA-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745814
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
single-strand binding protein
14_1009_16_30cm_scaffold_3178_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(22426..22755)
DNA (330bp) protein (110aa)
30S ribosomal protein S6 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA1_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rpsF; ribosomal protein S6
14_1009_16_30cm_scaffold_3178_22
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(22843..23346)
DNA (504bp) protein (168aa)
Peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EI90_9CHLR
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
14_1009_16_30cm_scaffold_3178_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(23470..24180)
DNA (711bp) protein (237aa)
50S ribosomal protein L25 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA3_9BACT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
14_1009_16_30cm_scaffold_3178_24
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(24164..25138)
DNA (975bp) protein (325aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
ribose-phosphate pyrophosphokinase n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036ACE68
14_1009_16_30cm_scaffold_3178_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

25241..26200
DNA (960bp) protein (320aa)
Fatty acid desaturase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXT9_9BACT
Fatty acid desaturase {ECO:0000313|EMBL:EDY21087.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative fatty acid desaturase
14_1009_16_30cm_scaffold_3178_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(26212..26496)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6A5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18014.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_1009_16_30cm_scaffold_3178_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

26748..27617
DNA (870bp) protein (290aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6A4_9BACT
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EDY18013.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cof; HAD superfamily hydrolase
14_1009_16_30cm_scaffold_3178_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

28150..28818
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21652.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_1009_16_30cm_scaffold_3178_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

28847..29458
DNA (612bp) protein (204aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW59_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY21651.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ECF subfamily RNA polymerase sigma-24 subunit
14_1009_16_30cm_scaffold_3178_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

29445..29972
DNA (528bp) protein (176aa)
Putative transmembrane anti-sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW58_9BACT
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EDY21650.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying items 1-30 of 35 in total

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