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13_1_40cm_2_scaffold_21528

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_21528_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3..248)
DNA (246bp) protein (82aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA gyrase subunit A id=2336356 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gyrA; DNA gyrase subunit A
13_1_40cm_2_scaffold_21528_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(264..2588)
DNA (2325bp) protein (775aa)
DNA gyrase B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] id=14625299 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA gyrase B subunit (EC:5.99.1.3)
13_1_40cm_2_scaffold_21528_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2585..3658)
DNA (1074bp) protein (358aa)
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA replication and repair protein RecF id=3212580 bin=GWC2_Methylomirabilis_70_16 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA replication and repair protein RecF
13_1_40cm_2_scaffold_21528_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3696..4790)
DNA (1095bp) protein (365aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=14625298 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA polymerase III subunit beta
13_1_40cm_2_scaffold_21528_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4954..6273)
DNA (1320bp) protein (440aa)
dnaA; chromosomal replication initiator protein dnaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaA; chromosomal replication initiator protein dnaA id=14625297 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
dnaA; chromosomal replication initiator protein dnaA
13_1_40cm_2_scaffold_21528_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6748..7002
DNA (255bp) protein (85aa)
Ribonuclease P protein component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribonuclease P protein component id=2324954 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_21528_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7229..8917
DNA (1689bp) protein (563aa)
Membrane protein insertase YidC id=2324956 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_21528_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8951..9571
DNA (621bp) protein (207aa)
glucose inhibited division protein; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=GWA2_Rokubacteria_73_35_curated
Ribosomal RNA small subunit methyltransferase G id=2324957 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glucose inhibited division protein
13_1_40cm_2_scaffold_21528_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9619..10164
DNA (546bp) protein (182aa)
Chromosome partitioning ATPase Soj id=2324958 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
soj1; sporulation initiation inhibitor protein Soj Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ParA family protein
Displaying 9 items

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