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13_1_40cm_2_scaffold_25994

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_25994_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2..181)
DNA (180bp) protein (60aa)
Heat shock protein Hsp20 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Heat shock protein Hsp20 id=4311462 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_25994_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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379..1005
DNA (627bp) protein (209aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4311463 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_25994_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1394..2203
DNA (810bp) protein (270aa)
protein mazG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protein mazG id=4311465 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein mazG
13_1_40cm_2_scaffold_25994_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2200..2736
DNA (537bp) protein (179aa)
Predicted phosphatase id=4311466 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase Tax=GWA2_Rokubacteria_73_35_curated
phosphatase
13_1_40cm_2_scaffold_25994_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2743..4485
DNA (1743bp) protein (581aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type IV-A pilus assembly ATPase PilB id=3773045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type IV-A pilus assembly ATPase PilB
13_1_40cm_2_scaffold_25994_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4517..5638
DNA (1122bp) protein (374aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Twitching motility protein id=3773050 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
twitching motility protein
13_1_40cm_2_scaffold_25994_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5658..6860
DNA (1203bp) protein (401aa)
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type 4 fimbrial assembly protein pilC id=4686861 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
type II secretion system protein
13_1_40cm_2_scaffold_25994_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6860..7240
DNA (381bp) protein (127aa)
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Multi-sensor signal transduction histidine kinase id=14625675 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Displaying 8 items

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