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13_1_40cm_2_scaffold_2730

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2730_1

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3..638
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003631B3C
Uncharacterized protein {ECO:0000313|EMBL:AKA49196.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
binding-protein-dependent transport system inner membrane protein
13_1_40cm_2_scaffold_2730_2
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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716..1501
DNA (786bp) protein (262aa)
ABC transporter, permease protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVJ6_9PROT
nitrate/sulfonate/bicarbonate ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ABC transporter permease
13_1_40cm_2_scaffold_2730_3
unknown

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1714..1995
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_2_scaffold_2730_4
unknown

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1973..2167
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_2_scaffold_2730_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2183..3103)
DNA (921bp) protein (307aa)
Oligopeptide ABC transporter permease protein id=4192677 bin=GWF2_Methylomirabilis_70_14 species=Ketogulonicigenium vulgare genus=Ketogulonicigenium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gsiD; Oligopeptide ABC transporter permease protein; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
gsiD; Oligopeptide ABC transporter permease protein
13_1_40cm_2_scaffold_2730_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3100..4023)
DNA (924bp) protein (308aa)
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport systems inner membrane component id=4192678 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_2730_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4075..5619)
DNA (1545bp) protein (515aa)
Oligopeptide ABC transpoter oligopeptide-binding protein id=4192679 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
oligopeptide ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_2730_8
unknown

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5948..6157
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_2_scaffold_2730_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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6341..7522
DNA (1182bp) protein (394aa)
FAD dependent oxidoreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C862_SPHTD
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACZ40005.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
13_1_40cm_2_scaffold_2730_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7869..8432
DNA (564bp) protein (188aa)
Putative uncharacterized protein id=2780637 bin=GWA2_Methylomirabilis_73_35 species=Pleurocapsa minor genus=Pleurocapsa taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_2730_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8536..9843)
DNA (1308bp) protein (436aa)
id=14627806 Tax=GWA2_Rokubacteria_73_35_curated
id=14627806 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_2730_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9866..10840)
DNA (975bp) protein (325aa)
ABC transporter substrate-binding protein n=2 Tax=Bordetella holmesii RepID=M5P3J7_9BORD
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
NMT1-like family protein
13_1_40cm_2_scaffold_2730_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10943..11743
DNA (801bp) protein (267aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding id=3880345 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyacyl-CoA dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_2_scaffold_2730_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11740..12492
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PIE1_9BRAD
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_20_curated
amino acid ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_2730_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12485..13189
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFL6_9BRAD
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_20_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_2730_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13226..14437
DNA (1212bp) protein (404aa)
ABC transporter substrate-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ8_9BURK
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
extracellular ligand-binding receptor
13_1_40cm_2_scaffold_2730_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14460..14900
DNA (441bp) protein (147aa)
Inner-membrane translocator n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBR7_METNO
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
13_1_40cm_2_scaffold_2730_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14909..15298
DNA (390bp) protein (130aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Putative branched-chain amino acid ABC transporter, permease component id=4594144 bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_1_40cm_2_scaffold_2730_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15300..16232
DNA (933bp) protein (311aa)
Branched-chain amino acid ABC transporter, permease protein id=4594145 bin=GWF2_Methylomirabilis_70_14 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
13_1_40cm_2_scaffold_2730_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16249..17049
DNA (801bp) protein (267aa)
naphthoate synthase; K01661 naphthoate synthase [EC:4.1.3.36] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dihydroxynaphthoic acid synthetase (EC:4.1.3.36)
Naphthoate synthase id=3880344 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_2730_21
unknown

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17238..17471
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 21 items

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