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13_1_20cm_4_scaffold_5626

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5626_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1..330)
DNA (330bp) protein (110aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=12557804 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter transmembrane region
13_1_20cm_4_scaffold_5626_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(343..1773)
DNA (1431bp) protein (477aa)
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
two-component hybrid sensor and regulator
13_1_20cm_4_scaffold_5626_3
Prevotella baroniae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2081..2641
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor n=1 Tax=Prevotella baroniae F0067 RepID=U2P1R5_9BACT
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ERK38116.1}; TaxID=1115809 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella baroniae F006
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_4_scaffold_5626_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2674..3684
DNA (1011bp) protein (337aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG51_RHOMR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEN72951.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
FecR anti-FecI sigma factor
13_1_20cm_4_scaffold_5626_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3698..5284
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036D12FC
TonB-dependent receptor {ECO:0000313|EMBL:AKD55684.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor
Displaying 5 items

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