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13_2_20cm_2_scaffold_19425

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_19425_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(3..116)
DNA (114bp) protein (38aa)
xerC; tyrosine recombinase xerC; K03733 integrase/recombinase XerC Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_2_20cm_2_scaffold_19425_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(89..1405)
DNA (1317bp) protein (439aa)
trmFO; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid (EC:2.1.1.-); K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] Tax=RBG_19FT_COMBO_Nitrospirae_5
trmFO; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid (EC:2.1.1.-)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA16_9BACT rbh
13_2_20cm_2_scaffold_19425_trna_1
unknown

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1530..1601
DNA (72bp)
transferRNA
13_2_20cm_2_scaffold_19425_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1948..2289
DNA (342bp) protein (114aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_2_20cm_2_scaffold_19425_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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2453..3619
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA03_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_19425_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(3647..4057)
DNA (411bp) protein (137aa)
Putative RNA polymerase-binding protein DksA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA02_9BACT
putative RNA polymerase-binding protein DksA; K06204 DnaK suppressor protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative RNA polymerase-binding protein DksA
13_2_20cm_2_scaffold_19425_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(4150..4752)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA01_9BACT rbh
recR; recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatu
13_2_20cm_2_scaffold_19425_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(4825..5151)
DNA (327bp) protein (109aa)
Nucleoid-associated protein ybaB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA00_9BACT
ybaB; hypothetical protein
Nucleoid-associated protein ybaB {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_2_scaffold_19425_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(5148..7037)
DNA (1890bp) protein (630aa)
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III, gamma and tau subunits {ECO:0000313|EMBL:CBK40058.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK40058.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrosp
DNA polymerase III, gamma and tau subunits n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Z9_9BACT rbh
13_2_20cm_2_scaffold_19425_9
unknown

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comp(7068..7202)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 10 items

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