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13_1_40cm_4_scaffold_12998

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12998_1
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..625)
DNA (624bp) protein (208aa)
YCII-related n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JL58_STREN
hypothetical protein; K09780 hypothetical protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
hypothetical protein
13_1_40cm_4_scaffold_12998_2
unknown

Not on your lists

1149..1622
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_4_scaffold_12998_3

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comp(1940..2245)
DNA (306bp) protein (102aa)
30S ribosomal protein S20 n=1 Tax=mine drainage metagenome RepID=E6PWY0_9ZZZZ
30S ribosomal protein S20 {ECO:0000313|EMBL:CBH99439.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S20
13_1_40cm_4_scaffold_12998_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3382..4002)
DNA (621bp) protein (207aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=12557727 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_4_scaffold_12998_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4300..5337
DNA (1038bp) protein (346aa)
PhoH-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKR1_KORVE
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PhoH-like protein
13_1_40cm_4_scaffold_12998_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

5334..5786
DNA (453bp) protein (151aa)
Endoribonuclease YbeY n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIW5_9BACT
hypothetical protein; K07042 probable rRNA maturation factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
metalloprotein
13_1_40cm_4_scaffold_12998_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5783..7069
DNA (1287bp) protein (429aa)
CBS domain protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKR3_KORVE
CBS domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_12998_8
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

7134..9875
DNA (2742bp) protein (914aa)
peptidase S15; K06978 id=24442057 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Novosphingobium lindaniclasticum genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S15; K06978 Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
GTP-binding protein Era
13_1_40cm_4_scaffold_12998_9
unknown

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comp(10031..10636)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_4_scaffold_12998_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(10867..12225)
DNA (1359bp) protein (453aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021K3_SOLUE
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Fis family transcriptional regulator
13_1_40cm_4_scaffold_12998_11
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(12222..14468)
DNA (2247bp) protein (749aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DC2F3
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
multi-sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_12998_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14784..16502
DNA (1719bp) protein (573aa)
Type II secretion system protein E n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV6_KORVE
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ABF40394.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_1_40cm_4_scaffold_12998_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

16518..17639
DNA (1122bp) protein (374aa)
Pilus retraction protein PilT n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI4_CHLTF
pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
pilus retraction protein PilT
13_1_40cm_4_scaffold_12998_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17709..18920
DNA (1212bp) protein (404aa)
Type II secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV8_KORVE
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
type II secretion system protein
13_1_40cm_4_scaffold_12998_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

19040..20653
DNA (1614bp) protein (538aa)
signal transduction histidine kinase, nitrogen specific, NtrB; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV9_KORVE
signal transduction histidine kinase, nitrogen specific, NtrB
13_1_40cm_4_scaffold_12998_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

20660..22081
DNA (1422bp) protein (474aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRW0_KORVE
two component, sigma54 specific, Fis family transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Fis family transcriptional regulator
13_1_40cm_4_scaffold_12998_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22364..22873
DNA (510bp) protein (170aa)
Pilin, type IV, putative n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRC9_KORVE
pilin, type IV
Pilin, type IV, putative {ECO:0000313|EMBL:ABF40571.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
13_1_40cm_4_scaffold_12998_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23041..23550
DNA (510bp) protein (170aa)
Pilin, type IV, putative n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRC9_KORVE
pilin, type IV
Pilin, type IV, putative {ECO:0000313|EMBL:ABF40571.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
Displaying 18 items

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