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13_1_40cm_4_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_84_1
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(1..156)
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:ACB08356.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
hypothetical protein
13_1_40cm_4_scaffold_84_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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304..534
DNA (231bp) protein (77aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7I1_NITGG
AsnC family transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AFU57191.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_4_scaffold_84_3
unknown

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814..978
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_84_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1027..1257
DNA (231bp) protein (77aa)
Gas vesicle structural protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS3_NITGG
gvpA2; gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_4_scaffold_84_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1369..1524
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJV8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59508.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_84_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1514..1768
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN18_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58599.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_84_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1918..3591)
DNA (1674bp) protein (558aa)
Archaeal thermosome n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEG7_NITGG
thsA4; archaeal thermosome
Archaeal thermosome {ECO:0000313|EMBL:AFU59736.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera garg
13_1_40cm_4_scaffold_84_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3719..4186)
DNA (468bp) protein (156aa)
Putative iron (Metal) dependent repressor, DtxR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA8_NITGG
putative iron (metal) dependent repressor, DtxR family
Putative iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:AIC14991.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrosospha
13_1_40cm_4_scaffold_84_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4183..5478)
DNA (1296bp) protein (432aa)
Putative metal cation transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID07_NITGG
metal cation transporter
Putative metal cation transporter {ECO:0000313|EMBL:AFU59261.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitro
13_1_40cm_4_scaffold_84_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5475..6572)
DNA (1098bp) protein (366aa)
Multicopper oxidase type 3 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH86_NITGG
multicopper oxidase type 3 rbh
Multicopper oxidase type 3 {ECO:0000313|EMBL:AFU59260.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
13_1_40cm_4_scaffold_84_11

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6680..6796
DNA (117bp) protein (39aa)
Ribonuclease J protein {ECO:0000313|EMBL:KFM20180.1}; EC=3.1.-.- {ECO:0000313|EMBL:KFM20180.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="
13_1_40cm_4_scaffold_84_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6977..7915
DNA (939bp) protein (313aa)
Alcohol dehydrogenase, zinc-containing n=1 Tax=Bacillus sp. B14905 RepID=A3IFS3_9BACI id=71486 bin=ACD50 species=Bacillus sp. B14905 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Zn-dependent oxidoreductase, NADPH:quinone reductase
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:AIF85176.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphae
13_1_40cm_4_scaffold_84_13
unknown

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8473..8670
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_84_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8743..8991
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00035D4A3B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16169.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_84_15
unknown

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9040..9183
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_4_scaffold_84_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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9476..9883
DNA (408bp) protein (136aa)
Flavin nucleotide binding protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV54_9ARCH
Flavin nucleotide binding protein {ECO:0000313|EMBL:CDI06427.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
flavin nucleotide binding protein
13_1_40cm_4_scaffold_84_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9907..11016)
DNA (1110bp) protein (370aa)
oxidoreductase (EC:1.-.-.-)
Putative oxidoreductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZ04_9DELT
Putative oxidoreductase {ECO:0000313|EMBL:EPX56086.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_40cm_4_scaffold_84_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11710..13152)
DNA (1443bp) protein (481aa)
Basic membrane protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ADE7_9CLOT
putative ABC uptake transporter, substrate-binding protein/surface lipoprotein
Putative ABC uptake transporter, substrate-binding protein/surface lipoprotein {ECO:0000313|EMBL:AIC15842.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitroso
13_1_40cm_4_scaffold_84_19
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13312..14256)
DNA (945bp) protein (315aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J867_DESRM
ABC uptake transporter, permease protein rbh
ABC uptake transporter, permease protein {ECO:0000313|EMBL:AIC15843.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_4_scaffold_84_20
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14253..15320)
DNA (1068bp) protein (356aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYV3_9CLOT
ABC uptake transporter, permease protein rbh
ABC uptake transporter, permease protein {ECO:0000313|EMBL:AIC15844.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_4_scaffold_84_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15317..16825)
DNA (1509bp) protein (503aa)
hor:Hore_08780 ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] id=1245997 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
yufO; ABC uptake transporter, ATP-binding protein
ABC uptake transporter, ATP-binding protein {ECO:0000313|EMBL:AIC15845.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sour
13_1_40cm_4_scaffold_84_22
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17322..18902
DNA (1581bp) protein (527aa)
fdrA; putative Succinyl-CoA ligase, alpha subunit
Putative Succinyl-CoA ligase, alpha subunit {ECO:0000313|EMBL:AIC15846.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sour
succinyl-CoA synthetase subunit alpha id=14426193 bin=bin1_lowGC species=Desulfitobacterium dehalogenans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
13_1_40cm_4_scaffold_84_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18904..19074
DNA (171bp) protein (57aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15847.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_84_24
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19093..20058
DNA (966bp) protein (322aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15848.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_84_25
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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20173..22086
DNA (1914bp) protein (638aa)
putative carbamate kinase with BmpA-like periplasmic binding domain (EC:2.7.2.2)
Putative carbamate kinase with BmpA-like periplasmic binding domain {ECO:0000313|EMBL:AIC15849.1}; EC=2.7.2.2 {ECO:0000313|EMBL:AIC15849.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrosospha
Carbamate kinase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9I0_9ARCH
13_1_40cm_4_scaffold_84_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22228..23496
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEU1_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15850.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_84_27
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23676..24215
DNA (540bp) protein (180aa)
purE2; N5-carboxyaminoimidazole ribonucleotide mutase (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=A7HM08_FERNB
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
13_1_40cm_4_scaffold_84_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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24583..24966
DNA (384bp) protein (128aa)
Putative signal transduction response regulator, receiver domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC9_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU57794.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphae
13_1_40cm_4_scaffold_84_29
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25136..26017
DNA (882bp) protein (294aa)
Isochorismatase hydrolase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WP13_9EURY
putative isochorismatase-like hydrolase
Putative isochorismatase-like hydrolase {ECO:0000313|EMBL:AIC15836.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_4_scaffold_84_30
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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26119..26991
DNA (873bp) protein (291aa)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU34_9ARCH
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
5-carboxymethyl-2-hydroxymuconate Delta-isomerase {ECO:0000313|EMBL:AIC15834.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;
Displaying items 1-30 of 51 in total

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