ggKbase home page

13_1_40cm_4_scaffold_18306

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_18306_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..197)
DNA (195bp) protein (65aa)
Maf-like protein IMCC9480_424 n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W282_9BURK
maf protein; K06287 septum formation protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
maf; septum formation protein Maf
13_1_40cm_4_scaffold_18306_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194..661)
DNA (468bp) protein (156aa)
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
50S rRNA methyltransferase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00035C8734
hypothetical protein
13_1_40cm_4_scaffold_18306_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(706..1065)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000374808F
hypothetical protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
13_1_40cm_4_scaffold_18306_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1055..1738)
DNA (684bp) protein (228aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:3.5.4.4); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_16_Gamma2_65_34_curated
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Azoarcus sp. KH32C RepID=H0PRT8_9RHOO
nicotinate (nicotinamide) nucleotide adenylyltransferase
13_1_40cm_4_scaffold_18306_5
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1793..3379)
DNA (1587bp) protein (529aa)
Monovalent cation:H+ antiporter, CPA1 family n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZK4_JANMA
Sodium, potassium, lithium and rubidium/H(+) antiporter {ECO:0000313|EMBL:EXI87598.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candida
yjcE; antiporter CPA1 family monovalent cation/proton antiporter
13_1_40cm_4_scaffold_18306_6
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3436..4002)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034D7FA5
Uncharacterized protein {ECO:0000313|EMBL:EZP38448.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
conserved hypothetical protein
13_1_40cm_4_scaffold_18306_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4110..5291
DNA (1182bp) protein (394aa)
Riboflavin synthase subunit alpha n=1 Tax=alpha proteobacterium BAL199 RepID=A8TL38_9PROT
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
major facilitator superfamily protein
13_1_40cm_4_scaffold_18306_8
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5343..6194
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037AAB64
Uncharacterized protein {ECO:0000313|EMBL:EEG09657.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenk
hypothetical protein
13_1_40cm_4_scaffold_18306_9
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6225..7409
DNA (1185bp) protein (395aa)
CoA transferase n=1 Tax=Massilia niastensis RepID=UPI0003659DAD
CoA-transferase {ECO:0000313|EMBL:KIF80512.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66
L-carnitine dehydratase/bile acid-inducible protein f
13_1_40cm_4_scaffold_18306_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7434..7895)
DNA (462bp) protein (154aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PROA_NITMU
13_1_40cm_4_scaffold_18306_11
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8740..9408)
DNA (669bp) protein (223aa)
cbbI; ribose-5-phosphate isomerase A (EC:5.3.1.6) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ribose-5-phosphate isomerase A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGL2_9PROT
Ribose-5-phosphate isomerase A
13_1_40cm_4_scaffold_18306_12
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9405..11195)
DNA (1791bp) protein (597aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Cand
lpdA; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Ralstonia sp. PBA RepID=I9BVQ8_9RALS
13_1_40cm_4_scaffold_18306_13
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11192..12967)
DNA (1776bp) protein (592aa)
pdhB; dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137, ECO:0000313|EMBL:CAQ69254.1};; TaxID=164546 species="Bacteria
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R4M1_CUPTR
13_1_40cm_4_scaffold_18306_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13084..14727)
DNA (1644bp) protein (548aa)
aceE; pyruvate dehydrogenase subunit E1 (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Pyruvate dehydrogenase E1 component n=1 Tax=Ralstonia sp. PBA RepID=I9W5Q2_9RALS
aceE; pyruvate dehydrogenase
Displaying 14 items

View Taxonomy