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13_1_40cm_4_scaffold_9876

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_9876_1
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
Cold-shock DNA-binding domain protein n=5 Tax=Ralstonia RepID=B2UIH2_RALPJ
cold-shock protein
cold shock-like protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
13_1_40cm_4_scaffold_9876_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(403..1428)
DNA (1026bp) protein (342aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_16_Betaproteobac
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Martelella mediterranea RepID=UPI000377D9BD
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
13_1_40cm_4_scaffold_9876_3
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1631..2488
DNA (858bp) protein (286aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CDS55300.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CDS55300.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Herbaspirillum sp. CF444 RepID=J2TR87_9BURK
13_1_40cm_4_scaffold_9876_4
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2531..3604
DNA (1074bp) protein (358aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CNW7_9BURK
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJN09584.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;"
sugar ABC transporter ATPase
13_1_40cm_4_scaffold_9876_5
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3668..4996
DNA (1329bp) protein (443aa)
ABC transporter substrate-binding protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FEC31B
Sugar ABC transporter periplasmic protein {ECO:0000313|EMBL:EHP41260.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_9876_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5156..6076
DNA (921bp) protein (307aa)
Permease component of ABC-type sugar transporter n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUB1_9BURK
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EHR69567.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkho
Maltose/maltodextrin ABC transporter, permease protein MalF
13_1_40cm_4_scaffold_9876_7
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6073..6936
DNA (864bp) protein (288aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E31_POLSJ
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_9876_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7385..9448)
DNA (2064bp) protein (688aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIK6_9PROT
13_1_40cm_4_scaffold_9876_9
unknown

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comp(9478..9546)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 9 items

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