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13_1_40cm_4_scaffold_2395

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2395_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(244..501)
DNA (258bp) protein (86aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Br
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DRG6_BRAJP
ATPase
13_1_40cm_4_scaffold_2395_2
unknown

Not on your lists

comp(498..767)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_2395_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(842..5386)
DNA (4545bp) protein (1515aa)
Type IV fimbrial biogenesis protein PilY1 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PD53_9DELT
Type IV fimbrial biogenesis protein PilY1 {ECO:0000313|EMBL:EPX60222.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystoba
Tfp pilus assembly protein tip-associated adhesin PilY1-like
13_1_40cm_4_scaffold_2395_4
unknown

Not on your lists

comp(5397..5870)
DNA (474bp) protein (158aa)
hypothetical protein
13_1_40cm_4_scaffold_2395_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5880..7103)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P6Z5_9DELT
hypothetical protein; K02672 type IV pilus assembly protein PilW Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_40cm_4_scaffold_2395_6
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7100..7720)
DNA (621bp) protein (207aa)
Type IV pilus modification protein PilV n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RRK5_ALLVD
type IV pilus modification protein PilV
Type IV pilus modification protein PilV {ECO:0000313|EMBL:ADC63917.1}; Flags: Precursor;; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromati
13_1_40cm_4_scaffold_2395_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7717..8439)
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA89360.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
fimT; type IV pilus assembly protein FimT
13_1_40cm_4_scaffold_2395_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8802..9086)
DNA (285bp) protein (95aa)
Protein kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAK8_ANADF
protein kinase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
protein kinase
13_1_40cm_4_scaffold_2395_9
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9089..11221)
DNA (2133bp) protein (711aa)
protein kinase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein id=8267367 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
protein kinase
13_1_40cm_4_scaffold_2395_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11508..11774)
DNA (267bp) protein (89aa)
Hydrolytic enzyme n=2 Tax=Pseudomonas aeruginosa RepID=U9MQX0_PSEAI
Hydrolytic enzyme {ECO:0000313|EMBL:EZP05127.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
alpha/beta hydrolase
13_1_40cm_4_scaffold_2395_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12926..15709
DNA (2784bp) protein (928aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJX2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33452.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_4_scaffold_2395_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15713..17161
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ER80_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97269.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_1_40cm_4_scaffold_2395_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17158..18207
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7N9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40406.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_4_scaffold_2395_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18194..20125
DNA (1932bp) protein (644aa)
Transglutaminase domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFZ1_HALO1
Small protein containing transglutaminase-like domain protein {ECO:0000313|EMBL:KFE69960.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystob
hypothetical protein
13_1_40cm_4_scaffold_2395_15
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20131..20940)
DNA (810bp) protein (270aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_40cm_4_scaffold_2395_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21033..21308
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEE7_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27093.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_2395_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21312..22436)
DNA (1125bp) protein (375aa)
23S rRNA (Guanine-N-2-)-methyltransferase rlmL n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QY47_9DELT
23S rRNA (Guanine-N-2-)-methyltransferase rlmL {ECO:0000313|EMBL:EPX61573.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cy
thump domain/methyltransferase domain-containing protein
13_1_40cm_4_scaffold_2395_18
unknown

Not on your lists

comp(22461..22661)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_2395_19
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22678..23397
DNA (720bp) protein (240aa)
L-proline glycine betaine ABC transport system permease protein ProV n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTP1_9DELT
ABC transporter-like protein; K05847 osmoprotectant transport system ATP-binding protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_2395_20
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23394..24815
DNA (1422bp) protein (474aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UMS1_ANASK
substrate-binding region of ABC-type glycine betaine transporter
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ACG74517.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcale
13_1_40cm_4_scaffold_2395_21
Gordonia neofelifaecis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24837..25853)
DNA (1017bp) protein (339aa)
AraC family transcriptional regulator n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YI77_9ACTO
AraC family transcriptional regulator {ECO:0000313|EMBL:EGD55631.1}; TaxID=644548 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia neofelifaecis NRRL B-
AraC family transcriptional regulator
13_1_40cm_4_scaffold_2395_22
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

25920..26171
DNA (252bp) protein (84aa)
gualylate cyclase n=1 Tax=Actinoplanes globisporus RepID=UPI0003825F3C
Putative gualylate cyclase protein {ECO:0000313|EMBL:CCF85097.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolance
putative gualylate cyclase protein
13_1_40cm_4_scaffold_2395_trna_1
unknown

Not on your lists

comp(26177..26249)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_2395_23
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26290..27357)
DNA (1068bp) protein (356aa)
Conserved uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FU87_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO73406.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" s
13_1_40cm_4_scaffold_2395_24
unknown

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comp(27566..27970)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_4_scaffold_2395_25
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27975..28277)
DNA (303bp) protein (101aa)
FHA/TonB domain protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FI25_STIAD
FHA/TonB domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EAU61944.1}; Flags: Fragment;; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmate
13_1_40cm_4_scaffold_2395_26
unknown

Not on your lists

28495..30069
DNA (1575bp) protein (525aa)

This feature has no annotations

13_1_40cm_4_scaffold_2395_27
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(30212..31321)
DNA (1110bp) protein (370aa)
Glr3240 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NGD1_GLOVI
Glr3240 protein {ECO:0000313|EMBL:BAC91181.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
Displaying 28 items

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