ggKbase home page

13_1_20cm_3_scaffold_1436

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1436_1
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(1..324)
DNA (324bp) protein (108aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=CSP1_4_Chloroflexi
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14630552 bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
13_1_20cm_3_scaffold_1436_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(357..1181)
DNA (825bp) protein (275aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirub
Cytochrome c oxidase subunit 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F349_CONWI
cytochrome C oxidase subunit II
13_1_20cm_3_scaffold_1436_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1305..2846)
DNA (1542bp) protein (514aa)
Glycosyl transferase, group 1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AX89_RUBXD
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABG03989.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="
group 1 glycosyl transferase
13_1_20cm_3_scaffold_1436_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3077..4573)
DNA (1497bp) protein (499aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6A9_CONWI
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB48782.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
EmrB/QacA subfamily drug resistance transporter
13_1_20cm_3_scaffold_1436_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4724..5086)
DNA (363bp) protein (121aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
13_1_20cm_3_scaffold_1436_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5170..6282
DNA (1113bp) protein (371aa)
Putative sigma factor includes region 2 n=1 Tax=Patulibacter medicamentivorans RepID=H0E4X7_9ACTN
Putative sigma factor includes region 2 {ECO:0000313|EMBL:EHN11272.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source=
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_1436_7
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6402..7124
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FNE5_SACEN
Uncharacterized protein {ECO:0000313|EMBL:CAM05570.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (
hypothetical protein
13_1_20cm_3_scaffold_1436_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7127..7507
DNA (381bp) protein (127aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF57_ANADF
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABS27353.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacter
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_3_scaffold_1436_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7647..7922
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B799CA
Uncharacterized protein {ECO:0000313|EMBL:ADB50321.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_1436_10
unknown

Not on your lists

7981..8190
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_3_scaffold_1436_11
unknown

Not on your lists

comp(8274..9032)
DNA (759bp) protein (253aa)

This feature has no annotations

13_1_20cm_3_scaffold_1436_12
unknown

Not on your lists

9137..9370
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_3_scaffold_1436_13
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

9367..10725
DNA (1359bp) protein (453aa)
amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RBG_16_Chloroflexi_64_32_curated
amidase (EC:3.5.1.4)
amidase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC6E
13_1_20cm_3_scaffold_1436_14
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10756..11718
DNA (963bp) protein (321aa)
ABC transporter ATP-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B44A7C
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGA11671.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
drrA: daunorubicin resistance ABC transporter, ATP-binding protein
13_1_20cm_3_scaffold_1436_15
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11715..12500
DNA (786bp) protein (262aa)
Putative multidrug ABC transporter permease protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3S0_9ACTN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter
putative multidrug ABC transporter permease protein
13_1_20cm_3_scaffold_1436_16
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12500..13270
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5DB69
Uncharacterized protein {ECO:0000313|EMBL:KIE49939.1}; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
putative multidrug ABC transporter permease protein
13_1_20cm_3_scaffold_1436_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13267..14484
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E644_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHN10813.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
hypothetical protein
13_1_20cm_3_scaffold_1436_18
unknown

Not on your lists

comp(14576..15406)
DNA (831bp) protein (277aa)

This feature has no annotations

13_1_20cm_3_scaffold_1436_19
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15516..15734)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X0M5_DESRD
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" so
translation initiation factor IF-1
13_1_20cm_3_scaffold_1436_20
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15786..16214)
DNA (429bp) protein (143aa)
Enoyl-CoA hydratase n=3 Tax=Amycolatopsis mediterranei RepID=D8I028_AMYMU
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJK45793.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardi
enoyl-CoA hydratase
13_1_20cm_3_scaffold_1436_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16506..16922)
DNA (417bp) protein (139aa)
Histidine triad (HIT) protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F337_CONWI
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADB50317.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
histidine triad (HIT) protein
13_1_20cm_3_scaffold_1436_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16968..18401)
DNA (1434bp) protein (478aa)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F335_CONWI
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:ADB50315.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacterace
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
13_1_20cm_3_scaffold_1436_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18398..18877)
DNA (480bp) protein (160aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=469383 species="Bacteria; Actinob
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F334_CONWI
Displaying 23 items

View Taxonomy