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13_1_20cm_3_scaffold_820

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_820_1
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..871)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00036390B1
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94138.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M
thioredoxin reductase
13_1_20cm_3_scaffold_820_2
unknown

Not on your lists

comp(1043..1564)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_3_scaffold_820_3
unknown

Not on your lists

1675..1788
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_3_scaffold_820_4
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2334..2957)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Methylobacterium RepID=B0ULU2_METS4
Uncharacterized protein {ECO:0000313|EMBL:ACA20357.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
hypothetical protein
13_1_20cm_3_scaffold_820_trna_1
unknown

Not on your lists

comp(3183..3256)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_820_5
Aeropyrum camini, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

3312..3779
DNA (468bp) protein (156aa)
Uncharacterized copper-binding protein n=1 Tax=Aeropyrum camini SY1 = JCM 12091 RepID=U3T856_9CREN
Uncharacterized copper-binding protein {ECO:0000313|EMBL:BAN89692.1}; TaxID=1198449 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum
uncharacterized copper-binding protein
13_1_20cm_3_scaffold_820_6
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

3861..4313
DNA (453bp) protein (151aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Uncharacterized conserved protein n=1 Tax=Candidatus Actinomarina minuta RepID=S5DVG0_9ACTN
13_1_20cm_3_scaffold_820_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4733..5677
DNA (945bp) protein (315aa)
FAD dependent oxidoreductase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD4_RUBXD
phytoene dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
FAD dependent oxidoreductase
13_1_20cm_3_scaffold_820_8
unknown

Not on your lists

5738..6721
DNA (984bp) protein (328aa)

This feature has no annotations

13_1_20cm_3_scaffold_820_9
R_SM2F11_52_17, SM2F11, Bacteria

Not on your lists

6741..7355
DNA (615bp) protein (205aa)
wcaJ; colanic acid biosysnthesis UDP-glucose lipid carrier transferase (EC:2.7.8.6); K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase Tax=RIFCSPHIGHO2_01_SM2F11_52_17_c
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00035D3D5C
putative glycosyltransferase
13_1_20cm_3_scaffold_820_10
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7381..8151
DNA (771bp) protein (257aa)
Type II secretion system protein E:General secretory system II, protein E, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HP6_DECAR
type II secretion system protein E
Tax=BJP_IG2103_Dechloromonas_63_51
13_1_20cm_3_scaffold_820_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8148..8765)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JRU9_STREN
Peptidase C26 {ECO:0000313|EMBL:ACY98027.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 1
hypothetical protein
13_1_20cm_3_scaffold_820_12
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8851..9507)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJS0_BLASD
Uncharacterized protein {ECO:0000313|EMBL:CCG03573.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
hypothetical protein
13_1_20cm_3_scaffold_820_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9867..10709
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Streptomyces sp. ScaeMP-e10 RepID=UPI00036C372D
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
Secreted protein
13_1_20cm_3_scaffold_820_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10855..11277
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B47932
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_3_scaffold_820_15

Not on your lists

11278..11688
DNA (411bp) protein (137aa)
Marine sediment metagenome DNA, contig: S01H1_S38802 {ECO:0000313|EMBL:GAG52457.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
F420-dependent oxidoreductase
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein id=24616652 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
13_1_20cm_3_scaffold_820_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11698..12129
DNA (432bp) protein (144aa)
Transcriptional regulator, AraC family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9R4_CONWI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB51126.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
AraC family transcriptional regulator
13_1_20cm_3_scaffold_820_17
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12168..12587
DNA (420bp) protein (140aa)
Glyoxalase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WNX4_MYCKA
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:ETZ97523.1}; TaxID=1299328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" s
glyoxalase
13_1_20cm_3_scaffold_820_18
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12597..12986
DNA (390bp) protein (130aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLD7_MESCW
Aldehyde-activating protein {ECO:0000313|EMBL:KGM32312.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus l
glutathione-dependent formaldehyde-activating protein
13_1_20cm_3_scaffold_820_19
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12949..14070)
DNA (1122bp) protein (374aa)
RNA polymerase sigma24 factor n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037AAC3B
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:EWT02150.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRR
putative ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_820_20
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14172..14612)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036183A5
Uncharacterized protein {ECO:0000313|EMBL:EWT02149.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
hypothetical protein
13_1_20cm_3_scaffold_820_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14674..15705)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG47_ANADF
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_820_22
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(15702..16535)
DNA (834bp) protein (278aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBR3_THET1
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACZ42228.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_820_23
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16532..17161)
DNA (630bp) protein (210aa)
ROK family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YD49_MESOW
ROK family protein {ECO:0000313|EMBL:AEH85584.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportuni
ROK family protein
13_1_20cm_3_scaffold_820_24
unknown

Not on your lists

17162..17353
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_3_scaffold_820_25
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(17356..18099)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003652827
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_20cm_3_scaffold_820_26
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18122..18676)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI000375BD71
Uncharacterized protein {ECO:0000313|EMBL:KJK50448.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noc
hypothetical protein
13_1_20cm_3_scaffold_820_27
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19282..19662)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003710D52
Uncharacterized protein {ECO:0000313|EMBL:KGN30121.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
13_1_20cm_3_scaffold_820_28
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19779..20879
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003600BD7
Uncharacterized protein {ECO:0000313|EMBL:KHO28185.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
phage tail sheath family protein
13_1_20cm_3_scaffold_820_29
Streptomyces sp. BoleA5, Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(20876..21493)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037A58F0
Displaying items 1-30 of 31 in total

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