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13_1_20cm_4_scaffold_328

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_328_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..1141)
DNA (1140bp) protein (380aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Adenylate/guanylate cyclase id=4154448 bin=GWC2_Methylomirabilis_70_16 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator
13_1_20cm_4_scaffold_328_2
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

1974..3803
DNA (1830bp) protein (610aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPP3_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:BAL58129.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
BNR repeat-containing glycosyl hydrolase
13_1_20cm_4_scaffold_328_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3888..4427
DNA (540bp) protein (180aa)
id=12557778 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_328_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4622..5818
DNA (1197bp) protein (399aa)
Alkaline serine exoprotease A n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PIA9_9DELT
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AHG89137.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase S8 and S53 subtilisin kexin sedolisin
13_1_20cm_4_scaffold_328_5
unknown

Not on your lists

comp(5819..5980)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_4_scaffold_328_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6233..7444)
DNA (1212bp) protein (404aa)
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
sodium/calcium exchanger membrane region; K07301 inner membrane protein id=14425893 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
sodium/calcium exchanger membrane region
13_1_20cm_4_scaffold_328_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7484..8140
DNA (657bp) protein (219aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G2_GEMAT
13_1_20cm_4_scaffold_328_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8137..8856
DNA (720bp) protein (240aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G3_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_328_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8857..10695
DNA (1839bp) protein (613aa)
metallopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
atm:ANT_23030 peptidase M23 family protein id=1246538 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
M23/M37 peptidase domain-containing protein
13_1_20cm_4_scaffold_328_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10706..11311
DNA (606bp) protein (202aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_328_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11312..13129)
DNA (1818bp) protein (606aa)
fadD; Long-chain acyl-CoA synthetase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
AMP-dependent synthetase and ligase
fadD; Long-chain acyl-CoA synthetase id=17241408 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
13_1_20cm_4_scaffold_328_12
unknown

Not on your lists

comp(13126..13935)
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_20cm_4_scaffold_328_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14015..14161)
DNA (147bp) protein (49aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_328_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14214..14765
DNA (552bp) protein (184aa)
Purine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H0_GEMAT
purine phosphoribosyltransferase; K07101 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosyltransferase
13_1_20cm_4_scaffold_328_15
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

14762..16141
DNA (1380bp) protein (460aa)
peptidase U62 modulator of DNA gyrase; K03568 TldD protein Tax=GWC2_Chloroflexi_49_37_curated
Peptidase id=2026683 bin=GWD2_Chloroflexi_49_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
peptidase U62 modulator of DNA gyrase
13_1_20cm_4_scaffold_328_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16138..17490
DNA (1353bp) protein (451aa)
peptidase U62 modulator of DNA gyrase; K03592 PmbA protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase U62, modulator of DNA gyrase id=4827012 bin=GWC2_Chloroflexi_49_37 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
peptidase U62 modulator of DNA gyrase
13_1_20cm_4_scaffold_328_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17510..18073)
DNA (564bp) protein (188aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_328_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18087..20105)
DNA (2019bp) protein (673aa)
ligA; NAD(+)-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DNLJ_GEMAT
DNA ligase
13_1_20cm_4_scaffold_328_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20102..20863)
DNA (762bp) protein (254aa)
Sensor histidine kinase/response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D3G7_MYXXD
sensor histidine kinase/response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_1_20cm_4_scaffold_328_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20950..22314
DNA (1365bp) protein (455aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJB6_CHLTF
13_1_20cm_4_scaffold_328_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22311..23111)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_328_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23150..24481
DNA (1332bp) protein (444aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:BAH37835.1}; EC=2.4.2.2 {ECO:0000313|EMBL:BAH37835.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H5_GEMAT
13_1_20cm_4_scaffold_328_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24478..26427)
DNA (1950bp) protein (650aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA gyrase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J5_GEMAT
DNA gyrase B subunit
13_1_20cm_4_scaffold_328_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(26434..26751)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF721
13_1_20cm_4_scaffold_328_25
unknown

Not on your lists

comp(26920..27312)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_4_scaffold_328_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(27309..28091)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J8_GEMAT
13_1_20cm_4_scaffold_328_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

28250..28666
DNA (417bp) protein (139aa)
initiation factor 2B related family protein; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R0Q1_PIRSD
13_1_20cm_4_scaffold_328_28
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

28656..29150
DNA (495bp) protein (165aa)
Methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000255|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000255|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00
eIF-2B alpha/beta/delta-like protein (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=MTNA_ROSCS
13_1_20cm_4_scaffold_328_29

Not on your lists

29215..29685
DNA (471bp) protein (157aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SIR4_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL56050.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
13_1_20cm_4_scaffold_328_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

29692..30099
DNA (408bp) protein (136aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K1_GEMAT
ccmE; cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CcmE/CycJ protein
Displaying items 1-30 of 65 in total

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