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13_1_20cm_4_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_93_1
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..425)
DNA (423bp) protein (141aa)
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B62258
TonB-dependent receptor plug Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
TonB-dependent receptor
13_1_20cm_4_scaffold_93_2
unknown

Not on your lists

comp(544..867)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_4_scaffold_93_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(873..1700)
DNA (828bp) protein (276aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT04_9BACT
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-3 protein
13_1_20cm_4_scaffold_93_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1713..2753)
DNA (1041bp) protein (347aa)
ABC-type metal ion transporter, periplasmic subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT05_9BACT
troA; periplasmic zinc binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
troA; periplasmic zinc binding protein
13_1_20cm_4_scaffold_93_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2755..4023)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT06_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_93_6
unknown

Not on your lists

comp(4123..4476)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_4_scaffold_93_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4473..5369)
DNA (897bp) protein (299aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M8_GEMAT
endonuclease 4
13_1_20cm_4_scaffold_93_8
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5366..5992)
DNA (627bp) protein (209aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_16_Desulfobacca_60_12_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FI22_9EURY
13_1_20cm_4_scaffold_93_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6109..7551
DNA (1443bp) protein (481aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative two-component response regulator
13_1_20cm_4_scaffold_93_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7626..8798)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Peptidase M23
13_1_20cm_4_scaffold_93_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8863..9720)
DNA (858bp) protein (286aa)
Cell division protein FtsX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M6_GEMAT
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF214
13_1_20cm_4_scaffold_93_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9717..10412)
DNA (696bp) protein (232aa)
Cell division ATP-binding protein FtsE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M5_GEMAT
ftsE; cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division ATP-binding protein FtsE
13_1_20cm_4_scaffold_93_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10413..11567)
DNA (1155bp) protein (385aa)
Cystathionine beta-lyase MetC n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SPC9_9CHLR
metB; Cystathionine gamma-synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_1_20cm_4_scaffold_93_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11564..12058)
DNA (495bp) protein (165aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91293.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_4_scaffold_93_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12055..12972)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_93_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12969..13856)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M0_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
PfkB domain protein
13_1_20cm_4_scaffold_93_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13880..14845)
DNA (966bp) protein (322aa)
glk; glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glucokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L9_GEMAT
ROK family protein
13_1_20cm_4_scaffold_93_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14823..15830)
DNA (1008bp) protein (336aa)
putative heptosyltransferase (EC:2.4.-.-); K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
glycosyl transferase family 9
Putative heptosyltransferase id=3656687 bin=GWC2_Ignavibacteria_56_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_20cm_4_scaffold_93_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15823..17622)
DNA (1800bp) protein (600aa)
Elongation factor 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L7_GEMAT
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lepA; GTP-binding protein LepA
13_1_20cm_4_scaffold_93_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17863..18795
DNA (933bp) protein (311aa)
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcription termination factor
13_1_20cm_4_scaffold_93_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18799..20340)
DNA (1542bp) protein (514aa)
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Aminopeptidase id=3410210 bin=GWA2_Ignavibacteria_55_11 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative aminopeptidase
13_1_20cm_4_scaffold_93_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20432..21859)
DNA (1428bp) protein (476aa)
OmpA/MotB domain protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZAR1_METPB
GF13555 gene product from transcript GF13555-RA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
OmpA/MotB domain-containing protein
13_1_20cm_4_scaffold_93_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22027..22911
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF58
13_1_20cm_4_scaffold_93_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22908..24065
DNA (1158bp) protein (386aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
double-transmembrane region domain protein
13_1_20cm_4_scaffold_93_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24062..24490
DNA (429bp) protein (143aa)
Double-transmembrane region domain protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_93_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24490..26031
DNA (1542bp) protein (514aa)
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
transcription-repair coupling factor
13_1_20cm_4_scaffold_93_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26040..27635
DNA (1596bp) protein (532aa)
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
transcription-repair coupling factor
13_1_20cm_4_scaffold_93_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

27646..29103
DNA (1458bp) protein (486aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L2_GEMAT
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_20cm_4_scaffold_93_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

29104..30426
DNA (1323bp) protein (441aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L1_GEMAT
SurA domain-containing protein
13_1_20cm_4_scaffold_93_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

30431..31372
DNA (942bp) protein (314aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L0_GEMAT
4-hydroxythreonine-4-phosphate dehydrogenase
Displaying items 1-30 of 45 in total

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