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13_1_20cm_4_scaffold_1897

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1897_1
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(3..728)
DNA (726bp) protein (242aa)
Isocitrate dehydrogenase (NADP(+)) n=1 Tax=Desmospora sp. 8437 RepID=F5SFD8_9BACL
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:ABX02785.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpe
isocitrate/isopropylmalate dehydrogenase
13_1_20cm_4_scaffold_1897_2
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

746..1798
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036B6CC9
Putative DNA topoisomerase I {ECO:0000313|EMBL:KFC74290.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC2
topoisomerase IB
13_1_20cm_4_scaffold_1897_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1859..2056
DNA (198bp) protein (66aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_1897_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2131..5064
DNA (2934bp) protein (978aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B4A818
ATP-dependent nuclease subunit B-like protein Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_1897_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5061..5855
DNA (795bp) protein (265aa)
UvrD/REP helicase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F256_CONWI
UvrD/REP helicase Tax=RBG_16_Actinobacteria_68_12_curated
UvrD/REP helicase
13_1_20cm_4_scaffold_1897_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6315..6959
DNA (645bp) protein (215aa)
Plectin n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAE3_CONWI
Plectin {ECO:0000313|EMBL:ADB49212.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM
LigA
13_1_20cm_4_scaffold_1897_7
unknown

Not on your lists

comp(7567..7875)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_4_scaffold_1897_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

8147..8815
DNA (669bp) protein (223aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_Actinobacteria_67_10_curated
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=uncultured Chlorobi bacterium RepID=H5SGM3_9BACT
13_1_20cm_4_scaffold_1897_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8829..9344
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZ56_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AGZ42144.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
hypothetical protein
13_1_20cm_4_scaffold_1897_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9378..9671
DNA (294bp) protein (98aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_1897_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9655..10104)
DNA (450bp) protein (150aa)
Putative PAS/PAC sensor protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY5_CONWI
PAS/PAC sensor protein Tax=RBG_16_Actinobacteria_67_10_curated
PAS/PAC sensor protein
13_1_20cm_4_scaffold_1897_12
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10133..11137)
DNA (1005bp) protein (335aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNI8_ROSCS
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Rose
magnesium and cobalt transport protein CorA
13_1_20cm_4_scaffold_1897_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11140..12117)
DNA (978bp) protein (326aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RBG_16_Actinobacteria_67_10_curated
Thioredoxin reductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBG9_THET1
thioredoxin reductase
13_1_20cm_4_scaffold_1897_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12201..12719)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBR5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP41800.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
13_1_20cm_4_scaffold_1897_15
unknown

Not on your lists

comp(12742..13032)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_20cm_4_scaffold_1897_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13143..14282
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ98_CONWI
peptide chain release factor 1 (eRF1)-like protein; K03265 peptide chain release factor subunit 1 Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_4_scaffold_1897_17
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14421..14933
DNA (513bp) protein (171aa)
GCN5-related N-acetyltransferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E4J2_9ACTN
Acetyltransferase {ECO:0000313|EMBL:EYU66402.1}; TaxID=1460244 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
acetyltransferase
13_1_20cm_4_scaffold_1897_18
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

14945..15592
DNA (648bp) protein (216aa)
Aconitase {ECO:0000313|EMBL:ABG05736.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ABG05736.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae;
aconitate hydratase (EC:4.2.1.3)
Aconitase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS92_RUBXD
13_1_20cm_4_scaffold_1897_19
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15621..16772
DNA (1152bp) protein (384aa)
Aconitase {ECO:0000313|EMBL:ABG05736.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ABG05736.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae;
aconitate hydratase (EC:4.2.1.3)
Aconitase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS92_RUBXD
13_1_20cm_4_scaffold_1897_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16769..17806)
DNA (1038bp) protein (346aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein; K09760 DNA recombination protein RmuC id=7200947 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
13_1_20cm_4_scaffold_1897_21
unknown

Not on your lists

comp(17886..18080)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_4_scaffold_1897_22
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

18183..18938
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JYW2_STREN
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
hypothetical protein
13_1_20cm_4_scaffold_1897_trna_1
unknown

Not on your lists

18969..19056
DNA (88bp)
transferRNA
13_1_20cm_4_scaffold_1897_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19269..20222)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003686EE7
cell surface protein Tax=RBG_13_Bathyarchaeota_38_9_curated
WD40 domain-containing protein
13_1_20cm_4_scaffold_1897_24
unknown

Not on your lists

comp(20448..20732)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_4_scaffold_1897_25
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(21300..23168)
DNA (1869bp) protein (623aa)
Copper resistance protein CopC n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA49_SPHTD
Copper resistance protein CopC {ECO:0000313|EMBL:ACZ40692.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacterace
copper resistance protein CopC
Displaying 26 items

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