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13_1_20cm_4_scaffold_3118

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3118_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(40..1062)
DNA (1023bp) protein (341aa)
fructose-1,6-bisphosphatase; K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
glpX; Fructose-1,6-bisphosphatase class 2 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QUP6_9ACTO
13_1_20cm_4_scaffold_3118_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(1080..2609)
DNA (1530bp) protein (510aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=469383 species="Bacteria; Acti
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F836_CONWI
13_1_20cm_4_scaffold_3118_3
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(2596..3618)
DNA (1023bp) protein (341aa)
Potassium channel protein n=2 Tax=Synechococcus elongatus RepID=Q31QF4_SYNE7
TrkA domain-containing protein Tax=RBG_16_Actinobacteria_64_13_curated
potassium channel protein
13_1_20cm_4_scaffold_3118_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3639..3938
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F838_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB52932.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_3118_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3898..5136)
DNA (1239bp) protein (413aa)
ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RBG_16_Actinobacteria_67_10_curated
Peptidase M48 Ste24p n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAC0_GEOOG
peptidase M48 Ste24p
13_1_20cm_4_scaffold_3118_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5186..5845
DNA (660bp) protein (220aa)
Diadenosine tetraphosphatase n=1 Tax=Patulibacter medicamentivorans RepID=H0E684_9ACTN
Diadenosine tetraphosphatase {ECO:0000313|EMBL:EHN10853.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibact
metallophosphoesterase
13_1_20cm_4_scaffold_3118_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(5842..6024)
DNA (183bp) protein (61aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_3118_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6027..6197)
DNA (171bp) protein (57aa)
Transcriptional regulator, Fis family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEX1_SYNFM
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Actinobacteria_68_12_curated
Fis family transcriptional regulator
13_1_20cm_4_scaffold_3118_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6301..7779)
DNA (1479bp) protein (493aa)
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_16_Actinobacteria_68_12_curated
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKU5_THEM7
13_1_20cm_4_scaffold_3118_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7746..8435)
DNA (690bp) protein (230aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_16_Actinobacteria_67_10_curated
Triosephosphate isomerase n=1 Tax=Synechococcus elongatus (strain PCC 7942) RepID=Q31NS8_SYNE7
triosephosphate isomerase
13_1_20cm_4_scaffold_3118_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8460..9638)
DNA (1179bp) protein (393aa)
Probable class-V aminotransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8X4_SORC5 rbh
Probable class-V aminotransferase {ECO:0000313|EMBL:CAN99083.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="So
class-V aminotransferase
13_1_20cm_4_scaffold_3118_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9635..10630)
DNA (996bp) protein (332aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RBG_16_Actinobacteria_67_10_curated
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=PGK_RUBXD
13_1_20cm_4_scaffold_3118_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10680..11717)
DNA (1038bp) protein (346aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-) Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WC56_KINRD rbh
13_1_20cm_4_scaffold_3118_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12067..12864)
DNA (798bp) protein (266aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=WHIA_HELMI
hypothetical protein; K09762 hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_4_scaffold_3118_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12851..13315)
DNA (465bp) protein (155aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_16_Actinobacteria_67_10_curated
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YXM5_METPS
ogt; methylated-DNA--protein-cysteine methyltransferase
13_1_20cm_4_scaffold_3118_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13346..15019
DNA (1674bp) protein (558aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI13_RHOM4 rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ACY48121.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sou
delta-1-pyrroline-5-carboxylate dehydrogenase
13_1_20cm_4_scaffold_3118_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15038..15985
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F270_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB50245.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_3118_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15879..17168)
DNA (1290bp) protein (430aa)
Major facilitator superfamily MFS_1 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1K1_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AHG93667.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF894 DitE
13_1_20cm_4_scaffold_3118_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(17238..17531)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TL69_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH86519.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
13_1_20cm_4_scaffold_3118_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17756..18592)
DNA (837bp) protein (279aa)
UvrABC system protein C n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V4_CONWI
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RBG_16_Actinobacteria_67_10_curated
excinuclease ABC subunit C
Displaying 20 items

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