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13_1_20cm_4_scaffold_380

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_380_1
unknown

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_20cm_4_scaffold_380_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

173..484
DNA (312bp) protein (104aa)
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
dioxygenase, ferredoxin subunit id=14430310 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
Rieske (2Fe-2S) oxidoreductase
13_1_20cm_4_scaffold_380_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

510..809
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T328_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ABJ84345.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
13_1_20cm_4_scaffold_380_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(966..1676)
DNA (711bp) protein (237aa)
Cytochrome biogenesis protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDD9_9CHLR
Cytochrome biogenesis protein {ECO:0000313|EMBL:CCF82701.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;"
cytochrome C biogenesis protein transmembrane region
13_1_20cm_4_scaffold_380_5

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comp(1676..2143)
DNA (468bp) protein (156aa)
Putative cytochrome C biogenesis protein n=1 Tax=uncultured marine microorganism HF4000_APKG8C21 RepID=B3TA18_9ZZZZ
Putative cytochrome C biogenesis protein {ECO:0000313|EMBL:ABZ09427.1}; TaxID=455553 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8C21.;
c-type cytochromes biosynthesis protein
13_1_20cm_4_scaffold_380_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2140..2682)
DNA (543bp) protein (181aa)
redoxin domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
redoxin domain-containing protein id=14633026 bin=bin9_gal15 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
alkyl hydroperoxide reductase
13_1_20cm_4_scaffold_380_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2685..3638)
DNA (954bp) protein (318aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_380_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3679..4335)
DNA (657bp) protein (219aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RBG_16_Actinobacteria_68_12_curated
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2S5_CONWI
glycerophosphoryl diester phosphodiesterase
13_1_20cm_4_scaffold_380_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4443..7115)
DNA (2673bp) protein (891aa)
Stage II sporulation E family protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IFJ1_9CHLR
GAF sensor-containing protein serine phosphatase Tax=CG_Solirubrobact_01
regulatory protein
13_1_20cm_4_scaffold_380_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7252..7485
DNA (234bp) protein (78aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_380_11
unknown

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comp(7482..7712)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_380_12
unknown

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7772..8068
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_20cm_4_scaffold_380_13
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8101..8499)
DNA (399bp) protein (133aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0T1_PELTS
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:BAF60153.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculu
phosphoesterase, PA-phosphatase related protein
13_1_20cm_4_scaffold_380_14
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8619..9212)
DNA (594bp) protein (198aa)
chemotaxis protein CheY n=1 Tax=Hoeflea sp. 108 RepID=UPI000375BD27
two component system response regulator Tax=RBG_16_Deltaproteobacteria_48_10_curated
response regulator receiver protein
13_1_20cm_4_scaffold_380_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9463..9777)
DNA (315bp) protein (105aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_380_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9837..10301)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003654421
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_380_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10291..10593)
DNA (303bp) protein (101aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_380_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10739..12154)
DNA (1416bp) protein (472aa)
pyruvate kinase (EC:2.7.1.40 2.7.9.2); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_16_Actinobacteria_68_12_curated
Pyruvate kinase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBG5_AMMDK
pyruvate kinase
13_1_20cm_4_scaffold_380_19
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12403..13674)
DNA (1272bp) protein (424aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Patulibacter medicamentivorans RepID=H0EAP6_9ACTN rbh
13_1_20cm_4_scaffold_380_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13671..14465)
DNA (795bp) protein (265aa)
MazG family protein; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RBG_16_Actinobacteria_68_12_curated
MazG family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF3_CONWI
MazG family protein
13_1_20cm_4_scaffold_380_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14466..15611)
DNA (1146bp) protein (382aa)
peptidyl-prolyl cis-trans isomerase, PpiC-type; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=RBG_16_Actinobacteria_68_12_curated
Foldase protein PrsA n=3 Tax=Clostridium acetobutylicum RepID=PRSA_CLOAB
prsA; peptidyl-prolyl isomerase
13_1_20cm_4_scaffold_380_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15580..18786)
DNA (3207bp) protein (1069aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_16_Actinobacteria_68_12_curated
Transcription-repair-coupling factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF5_CONWI
transcription-repair coupling factor
13_1_20cm_4_scaffold_380_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18841..19434)
DNA (594bp) protein (198aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EZG1_9NOCA
spoV; peptidyl-tRNA hydrolase, PTH1 family Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_380_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(19438..20082)
DNA (645bp) protein (215aa)
50S ribosomal protein L25 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF7_CONWI
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=469383 sp
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
13_1_20cm_4_scaffold_380_25
unknown

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20312..20515
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_4_scaffold_380_26
unknown

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comp(20574..21335)
DNA (762bp) protein (254aa)

This feature has no annotations

13_1_20cm_4_scaffold_380_27
unknown

Not on your lists

comp(21429..21620)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 27 items

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