ggKbase home page

13_1_20cm_4_scaffold_3892

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3892_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..177
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036EA11C
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:ADP84382.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_20cm_4_scaffold_3892_2
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217..582)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003699D85
Scaffold12, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31314.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
13_1_20cm_4_scaffold_3892_3
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

819..1472
DNA (654bp) protein (218aa)
Coenzyme F420-dependent NADP oxidoreductase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TAP4_9NOCA rbh
Coenzyme F420-dependent NADP oxidoreductase {ECO:0000313|EMBL:ELB87021.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratisla
NADP oxidoreductase coenzyme F420-dependent
13_1_20cm_4_scaffold_3892_4
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1475..2533
DNA (1059bp) protein (353aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2T8Q9_9NOCA rbh
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:ELB87022.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.
oxidoreductase, LLM family
13_1_20cm_4_scaffold_3892_5
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2556..3182
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XTM9_MICPN
Uncharacterized protein {ECO:0000313|EMBL:BAK37478.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
hypothetical protein
13_1_20cm_4_scaffold_3892_6
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

3228..3602
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIE4_9CHLR
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
13_1_20cm_4_scaffold_3892_7
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3609..4139)
DNA (531bp) protein (177aa)
maa; maltose O-acetyltransferase (EC:2.3.1.79)
Maltose O-acetyltransferase n=3 Tax=Haloferax RepID=L5NYT4_9EURY
Acetyltransferase {ECO:0000313|EMBL:CEA05381.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_a
13_1_20cm_4_scaffold_3892_8
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4136..4540)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI0003769FCD
Kinase-related protein {ECO:0000313|EMBL:EGD40915.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
frcK; fructose transport system kinase
13_1_20cm_4_scaffold_3892_9
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4780..5805)
DNA (1026bp) protein (342aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XJW3_9PSEU
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EHR61878.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora
putative protein yghZ
13_1_20cm_4_scaffold_3892_10
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5840..6544)
DNA (705bp) protein (235aa)
ABC transporter related protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BGX4_MEISD
ABC transporter related protein {ECO:0000313|EMBL:ADH62128.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (stra
ABC transporter-like protein
13_1_20cm_4_scaffold_3892_11
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6541..7569)
DNA (1029bp) protein (343aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ABW16356.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ABW16356.1};; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L4V7_FRASN
13_1_20cm_4_scaffold_3892_12
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(7678..8703)
DNA (1026bp) protein (342aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
sugar ABC transporter n=1 Tax=Burkholderia kururiensis RepID=UPI0003644958
Sugar ABC transporter {ECO:0000313|EMBL:AKH17383.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et a
13_1_20cm_4_scaffold_3892_13

Not on your lists

8830..9201
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000365F5AF
Marine sediment metagenome DNA, contig: S12H4_C02116 {ECO:0000313|EMBL:GAI67694.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
LacI family transcriptional repressor
Displaying 13 items

View Taxonomy