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13_1_20cm_4_scaffold_6449

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_6449_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1..504
DNA (504bp) protein (168aa)
NlpC/P60 family protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T1W6_CLOSG
nlp/P60 family protein Tax=RBG_16_Actinobacteria_67_10_curated
NlpC/P60 family protein
13_1_20cm_4_scaffold_6449_2
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(613..2208)
DNA (1596bp) protein (532aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=GWA2_Deltaproteobacteria_65_63_curated
AMP-dependent synthetase and ligase id=4285408 bin=GWA2_Deltaproteo_65_63 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
AMP-dependent synthetase and ligase
13_1_20cm_4_scaffold_6449_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2286..3161
DNA (876bp) protein (292aa)
Probable DNA repair protein Toce_0248 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0A6_THEOJ
Ku protein; K10979 DNA end-binding protein Ku Tax=RBG_16_Actinobacteria_67_10_curated
DNA end-binding protein Ku
13_1_20cm_4_scaffold_6449_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3176..3346)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EB82_9ACTN
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_6449_5
unknown

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comp(3710..4336)
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_20cm_4_scaffold_6449_trna_1
unknown

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4387..4460
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_6449_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4747..6039)
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTG4_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH83715.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
major facilitator superfamily protein
13_1_20cm_4_scaffold_6449_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6121..6798
DNA (678bp) protein (226aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E Tax=RBG_16_Actinobacteria_68_12_curated
HDHD3; haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform 1 id=12556572 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HAD-superfamily hydrolase
13_1_20cm_4_scaffold_6449_8
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6823..7251
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B1E9_FRADG
Uncharacterized protein {ECO:0000313|EMBL:AEH09821.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
hypothetical protein
13_1_20cm_4_scaffold_6449_9
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7262..8146
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RNW7_FRAAA
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:KJE24752.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
13_1_20cm_4_scaffold_6449_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8190..8807
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F053_CONWI
TetR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
TetR family transcriptional regulator
13_1_20cm_4_scaffold_6449_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8807..9964
DNA (1158bp) protein (386aa)
Major facilitator superfamily MFS_1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEZ0_CONWI
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB51707.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Cone
major facilitator superfamily protein
13_1_20cm_4_scaffold_6449_12
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(9965..11206)
DNA (1242bp) protein (414aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WXP1_ALIAD
acdA; acyl-CoA dehydrogenase Tax=RBG_13_Actinobacteria_55_18_curated
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_6449_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11411..12697
DNA (1287bp) protein (429aa)
O-antigen polymerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFB0_CONWI
O-antigen polymerase Tax=RBG_16_Actinobacteria_68_12_curated
O-antigen polymerase
13_1_20cm_4_scaffold_6449_14
unknown

Not on your lists

12714..13076
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_20cm_4_scaffold_6449_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13159..14175
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F223_CONWI
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_6449_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14326..15444
DNA (1119bp) protein (373aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=RBG_16_Actinobacteria_68_12_curated
Acyl-CoA dehydrogenase id=3942761 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
acyl-CoA dehydrogenase
Displaying 17 items

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