ggKbase home page

13_1_20cm_4_scaffold_696

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_696_1
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3..671)
DNA (669bp) protein (223aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RBG_16_Actinobacteria_68_21_curated
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B53997
cytochrome C oxidase subunit II
13_1_20cm_4_scaffold_696_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

700..966
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCP2_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB49515.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_696_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1095..1958
DNA (864bp) protein (288aa)
glnQ; glutamine ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] Tax=RBG_16_Actinobacteria_68_12_curated
ABC transporter n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JR12_STRRC
ABC transporter-like protein
13_1_20cm_4_scaffold_696_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1955..2866
DNA (912bp) protein (304aa)
Putative amino acid ABC transporter periplasmic solute-binding protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DDQ2_9BACI
putative amino acid ABC transporter periplasmic solute-binding protein; K02030 polar amino acid transport system substrate-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
amino acid ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_696_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2919..3644
DNA (726bp) protein (242aa)
Putative ABC amino acid transporter permease/substrate-binding protein n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6ZGY9_PSEST
ABC amino acid transporter permease/substrate-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
ABC amino acid transporter permease/substrate-binding protein
13_1_20cm_4_scaffold_696_6
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3645..4322
DNA (678bp) protein (226aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036DA3C7
Uncharacterized protein {ECO:0000313|EMBL:KIF71482.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
ABC transporter permease
13_1_20cm_4_scaffold_696_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4379..5803)
DNA (1425bp) protein (475aa)
integral membrane sensor signal transduction histidine kinase; K07653 two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] Tax=RBG_16_Actinobacteria_67_10_curated
Putative two-component system sensor n=1 Tax=Patulibacter medicamentivorans RepID=H0E9Y0_9ACTN
integral membrane sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_696_8
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5800..6486)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J3P5_9PSEU rbh
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:EHK81539.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhod
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
13_1_20cm_4_scaffold_696_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6799..7881
DNA (1083bp) protein (361aa)
peptidase S1 n=1 Tax=Patulibacter americanus RepID=UPI0003B5DC35
peptidase S1 and S6 chymotrypsin/Hap Tax=RBG_16_Actinobacteria_68_12_curated
peptidase S1 and S6 chymotrypsin/Hap
13_1_20cm_4_scaffold_696_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(8190..9515)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00035D28E0 rbh
Aminotransferase class-III {ECO:0000313|EMBL:ACZ39099.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" so
class III aminotransferase
13_1_20cm_4_scaffold_696_11
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10327..10989)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9H4_COLFT
Uncharacterized protein {ECO:0000313|EMBL:AEK62597.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivor
hypothetical protein
13_1_20cm_4_scaffold_696_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11036..12433)
DNA (1398bp) protein (466aa)
phenylhydantoinase; K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=RBG_16_Actinobacteria_68_12_curated
phenylhydantoinase (EC:3.5.2.2)
Dihydropyrimidinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASG7_RUBXD
13_1_20cm_4_scaffold_696_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12489..13616)
DNA (1128bp) protein (376aa)
ABC transporter substrate binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
Putative NMT1/THI5-like protein id=4428906 bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter substrate binding protein
13_1_20cm_4_scaffold_696_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13662..14492)
DNA (831bp) protein (277aa)
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RBG_16_Actinobacteria_68_12_curated
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein id=14629053 bin=bin8_Chloro species=unknown genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
binding-protein-dependent transport system inner membrane protein
13_1_20cm_4_scaffold_696_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14489..15169)
DNA (681bp) protein (227aa)
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter related protein id=4428908 bin=GWC2_Chloroflexi_73_18 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter
13_1_20cm_4_scaffold_696_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15166..16062)
DNA (897bp) protein (299aa)
putative ABC transporter permease protein Tax=RBG_16_Actinobacteria_67_10_curated
Putative ABC transporter permease protein id=4428909 bin=GWC2_Chloroflexi_73_18 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative ABC transporter permease protein
13_1_20cm_4_scaffold_696_17
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

16109..17095
DNA (987bp) protein (329aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:ADH63744.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ADH63744.1};; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermac
Amidase, hydantoinase/carbamoylase family n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BGC8_MEISD
amidase
13_1_20cm_4_scaffold_696_18
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17069..17668)
DNA (600bp) protein (200aa)
Putative Homoserine/threonine efflux protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EHK0_9RHIZ
Putative Homoserine/threonine efflux protein {ECO:0000313|EMBL:CCV03618.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sour
rhtB; Homoserine/threonine efflux protein
13_1_20cm_4_scaffold_696_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

17793..18008
DNA (216bp) protein (72aa)
methylenetetrahydromethanopterin reductase; K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBN9_9CHLR
Displaying 19 items

View Taxonomy