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13_1_20cm_4_scaffold_1370

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1370_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2..1783)
DNA (1782bp) protein (594aa)
UvrABC system protein A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAY8_CONWI
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit A
13_1_20cm_4_scaffold_1370_2
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1877..2299)
DNA (423bp) protein (141aa)
Membrane-flanked domain-containing protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AUK7_9EURY
Membrane-flanked domain-containing protein {ECO:0000313|EMBL:ELZ02250.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chaha
membrane-flanked domain-containing protein
13_1_20cm_4_scaffold_1370_3
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

2301..3398
DNA (1098bp) protein (366aa)
hypothetical protein Tax=RBG_16_Chloroflexi_54_18_curated
protein of unknown function UPF0118 id=136600 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
13_1_20cm_4_scaffold_1370_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3395..3730)
DNA (336bp) protein (112aa)
Response regulator receiver protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFJ4_CONWI
Response regulator receiver protein {ECO:0000313|EMBL:ADB53787.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Cone
response regulator receiver protein
13_1_20cm_4_scaffold_1370_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3789..4481
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFJ3_CONWI
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB53786.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Con
two component transcriptional regulator
13_1_20cm_4_scaffold_1370_6
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4491..5720)
DNA (1230bp) protein (410aa)
CHU large protein candidate xyloglucanase, glycoside hydrolase family 74 protein {ECO:0000313|EMBL:ABG58430.1}; EC=3.2.1.- {ECO:0000313|EMBL:ABG58430.1};; TaxID=269798 species="Bacteria; Bacteroidetes
CHU large protein; candidate xyloglucanase, glycoside hydrolase family 74 protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VY6_CYTH3
Predicted cell-wall-anchored protein SasA (LPXTG motif)
13_1_20cm_4_scaffold_1370_7
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6135..6665)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B51E13
Uncharacterized protein {ECO:0000313|EMBL:KHD98446.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
13_1_20cm_4_scaffold_1370_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6769..7008)
DNA (240bp) protein (80aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_1370_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7037..8008
DNA (972bp) protein (324aa)
Metallophosphoesterase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LA27_BURGS
DNA repair exonuclease Tax=RBG_16_Actinobacteria_68_12_curated
calcineurin-like phosphoesterase family protein
13_1_20cm_4_scaffold_1370_10
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7991..8476)
DNA (486bp) protein (162aa)
Putative transglycosylase associated protein n=1 Tax=Frankia sp. CN3 RepID=G6HLT0_9ACTO
Putative signal peptide protein {ECO:0000313|EMBL:ELQ82766.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp.
hypothetical protein
13_1_20cm_4_scaffold_1370_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8491..10503)
DNA (2013bp) protein (671aa)
UvrABC system protein B n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAY1_CONWI rbh
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RBG_16_Actinobacteria_68_12_curated
excinuclease ABC subunit B
13_1_20cm_4_scaffold_1370_12
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10524..10997
DNA (474bp) protein (158aa)
membrane protein n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0002E52E02
Sporulation protein yjcA {ECO:0000313|EMBL:CQR65419.1}; TaxID=1437453 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
integral membrane protein
13_1_20cm_4_scaffold_1370_13
unknown

Not on your lists

11196..12032
DNA (837bp) protein (279aa)

This feature has no annotations

13_1_20cm_4_scaffold_1370_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12029..12556)
DNA (528bp) protein (176aa)
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EHN12465.1}; EC=3.2.1.- {ECO:0000313|EMBL:EHN12465.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; P
Soluble lytic murein transglycosylase n=1 Tax=Patulibacter medicamentivorans RepID=H0E1I0_9ACTN
lytic transglycosylase
13_1_20cm_4_scaffold_1370_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12571..13188)
DNA (618bp) protein (206aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; Flags: Precursor;; TaxID=469383 sp
dephospho-CoA kinase (EC:2.7.1.24)
dephospho-CoA kinase n=1 Tax=Patulibacter americanus RepID=UPI0003B752A5
13_1_20cm_4_scaffold_1370_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(13151..14473)
DNA (1323bp) protein (441aa)
30S ribosomal protein S1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAX8_CONWI
RNA binding S1 domain protein {ECO:0000313|EMBL:ADB51291.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
RNA binding S1 domain-containing protein
13_1_20cm_4_scaffold_1370_17
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14535..16100)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000314C3D4
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EWT01166.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryza
hypothetical protein
13_1_20cm_4_scaffold_1370_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16123..18699)
DNA (2577bp) protein (859aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Co
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAX3_CONWI
13_1_20cm_4_scaffold_1370_19
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

18728..19618
DNA (891bp) protein (297aa)
GCN5-related N-acetyltransferase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FDZ8_VERMA
GCN5-like N-acetyltransferase Tax=RBG_16_RIF_CHLX_70_13_curated
GCN5-like N-acetyltransferase
13_1_20cm_4_scaffold_1370_20
unknown

Not on your lists

comp(19987..20373)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_4_scaffold_1370_21
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20447..20980
DNA (534bp) protein (178aa)
Transcriptional regulator {ECO:0000313|EMBL:KJR06608.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
hypothetical protein
13_1_20cm_4_scaffold_1370_22
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(20977..21714)
DNA (738bp) protein (246aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXJ0_ROSS1
ABC transporter related {ECO:0000313|EMBL:ABQ91343.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp.
ABC transporter-like protein
13_1_20cm_4_scaffold_1370_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21711..22508)
DNA (798bp) protein (266aa)
ABC transporter related protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF00_THET1
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ABC transporter
13_1_20cm_4_scaffold_1370_24
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22501..23880)
DNA (1380bp) protein (460aa)
Inner-membrane translocator n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUF1_RUBXD rbh
Inner-membrane translocator {ECO:0000313|EMBL:ABG04977.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrob
inner-membrane translocator
13_1_20cm_4_scaffold_1370_25
actinobacterium SCGC AAA027-L06, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23873..24142)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA278-I18 RepID=UPI00037008B3
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJX35835.1}; TaxID=913338 species="Bacteria; Actinobacteria.;" source="actinobacterium SCGC AAA027-L06.;"
branched-chain amino acid transport system / permease component family protein
Displaying 25 items

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