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13_1_20cm_4_scaffold_1837

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1837_1
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(49..345)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYJ1_NITHN
Uncharacterized protein {ECO:0000313|EMBL:ADE15979.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
hypothetical protein
13_1_20cm_4_scaffold_1837_2
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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425..1030
DNA (606bp) protein (202aa)
TetR family transcriptional regulator n=1 Tax=Rhodococcus sp. DK17 RepID=UPI0003123C6C
TetR family transcriptional regulator {ECO:0000313|EMBL:EWT00171.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryz
TetR family transcriptional regulator
13_1_20cm_4_scaffold_1837_3
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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996..1511
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R8E4_STRVP
Uncharacterized protein {ECO:0000313|EMBL:CCA53862.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC
hypothetical protein
13_1_20cm_4_scaffold_1837_4
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1453..3042)
DNA (1590bp) protein (530aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Frankia sp. QA3 RepID=I8QNK3_9ACTO
Putative integral membrane multidrug-efflux transport protein (Partial) {ECO:0000313|EMBL:CAJ59893.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frank
integral membrane multidrug-efflux transport protein
13_1_20cm_4_scaffold_1837_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3039..3677)
DNA (639bp) protein (213aa)
Transcriptional regulator TetR family n=1 Tax=Patulibacter medicamentivorans RepID=H0EA54_9ACTN
Transcriptional regulator TetR family {ECO:0000313|EMBL:EHN09394.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="P
TetR family transcriptional regulator
13_1_20cm_4_scaffold_1837_6
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3789..4520
DNA (732bp) protein (244aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8L1U6_9SYNC
Response regulator receiver domain protein {ECO:0000313|EMBL:EDX85438.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp.
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
13_1_20cm_4_scaffold_1837_7
CG_Arma_02, Armatimonadetes, Bacteria

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4474..4752
DNA (279bp) protein (93aa)
HD domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXP0_THERP
response regulator receiver modulated metal dependent phosphohydrolase Tax=CG_Arma_02
HD domain-containing protein
13_1_20cm_4_scaffold_1837_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4749..6362)
DNA (1614bp) protein (538aa)
ATP-dependent zinc metalloprotease FtsH 3 {ECO:0000255|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_01458};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrob
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
cell division protein FtsH n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5F2A8
13_1_20cm_4_scaffold_1837_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6441..6686)
DNA (246bp) protein (82aa)
ATP-dependent zinc metalloprotease FtsH 3 {ECO:0000255|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_01458};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrob
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
cell division protein FtsH n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5F2A8
13_1_20cm_4_scaffold_1837_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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6744..7676
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q3P1_KRIFD
Uncharacterized protein {ECO:0000313|EMBL:ADB35913.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (
hypothetical protein
13_1_20cm_4_scaffold_1837_11
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7571..8998)
DNA (1428bp) protein (476aa)
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=1830 species="Bact
putative DNA ligase (EC:6.5.1.1)
ATP-dependent DNA ligase n=1 Tax=Rhodococcus sp. P14 RepID=UPI00029A78D5
13_1_20cm_4_scaffold_1837_12
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8998..10191)
DNA (1194bp) protein (398aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=457406 species="Bacteria; Actinobacteria; Mic
DNA-directed DNA polymerase (EC:2.7.7.7)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037C1749
13_1_20cm_4_scaffold_1837_13
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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comp(10279..10719)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00038288F1
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
hypothetical protein
13_1_20cm_4_scaffold_1837_14
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10719..11027)
DNA (309bp) protein (103aa)
Putative MobA-like protein n=1 Tax=Frankia sp. QA3 RepID=I8QPQ8_9ACTO
Putative MobA-like protein {ECO:0000313|EMBL:EIV94462.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
13_1_20cm_4_scaffold_1837_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11048..12178)
DNA (1131bp) protein (377aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0M7_CONWI
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB53961.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
EmrB/QacA subfamily drug resistance transporter
Displaying 15 items

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