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13_1_20cm_4_scaffold_2301

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2301_1
unknown

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_20cm_4_scaffold_2301_2
unknown

Not on your lists

369..890
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_4_scaffold_2301_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

900..1094
DNA (195bp) protein (65aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_2301_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1091..1672)
DNA (582bp) protein (194aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RBG_16_Actinobacteria_68_12_curated
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 component n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYL6_THERP
13_1_20cm_4_scaffold_2301_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1629..3614)
DNA (1986bp) protein (662aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RBG_16_Actinobacteria_68_12_curated
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK1_CONWI
2-oxoglutarate dehydrogenase, E1 subunit
13_1_20cm_4_scaffold_2301_6
unknown

Not on your lists

comp(3637..3897)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_4_scaffold_2301_7
unknown

Not on your lists

comp(3894..4112)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_4_scaffold_2301_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4167..4826)
DNA (660bp) protein (220aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_2301_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4808..5416)
DNA (609bp) protein (203aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_2301_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5413..6741)
DNA (1329bp) protein (443aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_2301_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6866..7918
DNA (1053bp) protein (351aa)
RNA polymerase sigma 70 n=1 Tax=Patulibacter americanus RepID=UPI0003B5AA12
RNA polymerase sigma-28 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
RpoD subfamily RNA polymerase sigma-70 subunit
13_1_20cm_4_scaffold_2301_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7919..8284
DNA (366bp) protein (122aa)
Blr0519 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89X08_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ64955.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
hypothetical protein
13_1_20cm_4_scaffold_2301_13
unknown

Not on your lists

8400..8834
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_4_scaffold_2301_trna_1
unknown

Not on your lists

comp(8839..8911)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_2301_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8902..9198)
DNA (297bp) protein (99aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_2301_15
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

9296..9763
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0GZG1_STRA9
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
hypothetical protein
13_1_20cm_4_scaffold_2301_16
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9773..11164
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NCG6_KITSK
Uncharacterized protein {ECO:0000313|EMBL:BAJ28897.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33
hypothetical protein
13_1_20cm_4_scaffold_2301_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11113..11457)
DNA (345bp) protein (115aa)
ribosome-associated protein IOJAP n=1 Tax=Patulibacter americanus RepID=UPI0003B2FD79
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Cone
iojap family protein
13_1_20cm_4_scaffold_2301_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11454..12011)
DNA (558bp) protein (186aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9N0_CONWI
13_1_20cm_4_scaffold_2301_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12008..13201)
DNA (1194bp) protein (398aa)
GTPase Obg n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9M5_CONWI
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibac
GTP-binding protein Obg/CgtA
13_1_20cm_4_scaffold_2301_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13206..13460)
DNA (255bp) protein (85aa)
50S ribosomal protein L27 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W4K9_9GAMM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
50S ribosomal protein L27
13_1_20cm_4_scaffold_2301_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(13460..14014)
DNA (555bp) protein (185aa)
50S ribosomal protein L21 n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26HI4_FLABB
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RBG_16_Actinobacteria_67_10_curated
LSU ribosomal protein L21p
13_1_20cm_4_scaffold_2301_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14193..15848)
DNA (1656bp) protein (552aa)
Ribonuclease, Rne/Rng family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9M0_CONWI
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ADB51082.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacte
ribonuclease, Rne/Rng family
Displaying 23 items

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