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13_1_20cm_4_scaffold_398

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_398_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3..881
DNA (879bp) protein (293aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RBG_16_Actinobacteria_68_12_curated
riboflavin kinase n=1 Tax=Frankia sp. BCU110501 RepID=UPI000369B874
bifunctional riboflavin kinase/FMN adenylyltransferase
13_1_20cm_4_scaffold_398_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1135..2388)
DNA (1254bp) protein (418aa)
putative gamma-glutamyltranspeptidase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000362FF40
ggt; gamma-glutamyltransferase
13_1_20cm_4_scaffold_398_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2540..3484
DNA (945bp) protein (315aa)
Nod factor export ATP-binding protein I n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA22_9ACTO
Nod factor export ATP-binding protein I {ECO:0000313|EMBL:CCH20669.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora
ABC transporter-like protein
13_1_20cm_4_scaffold_398_4
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3481..4248
DNA (768bp) protein (256aa)
ABC-2 type transporter n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSV8_ACIC1
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain
ABC-2 type transporter
13_1_20cm_4_scaffold_398_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

4245..5018
DNA (774bp) protein (258aa)
ABC-type polysaccharide/polyol phosphate export systems permease; K09694 lipooligosaccharide transport system permease protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC-type polysaccharide/polyol phosphate export systems, permease component id=4531822 bin=GWC2_Chloroflexi_73_18 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter
13_1_20cm_4_scaffold_398_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


5104..5373
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Patulibacter americanus RepID=UPI0003B4BA41
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RBG_16_Actinobacteria_67_10_curated
30S ribosomal protein S15
13_1_20cm_4_scaffold_398_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

5470..6216
DNA (747bp) protein (249aa)
pnp; polynucleotide phosphorylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=CSP1_3_Armatimonadetes
pnp; polynucleotide phosphorylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=14632170 bin=bin9_gal15 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
13_1_20cm_4_scaffold_398_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6213..7817
DNA (1605bp) protein (535aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=469383
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE34_CONWI
13_1_20cm_4_scaffold_398_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7855..8916
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN33_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX57958.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_20cm_4_scaffold_398_10
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8916..9662
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3S9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56272.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_4_scaffold_398_11
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9622..10557)
DNA (936bp) protein (312aa)
Putative Galactokinase {ECO:0000313|EMBL:CCM62093.1}; EC=2.7.1.6 {ECO:0000313|EMBL:CCM62093.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000367AF02
hypothetical protein
13_1_20cm_4_scaffold_398_12
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

10572..11789
DNA (1218bp) protein (406aa)
Glycoside hydrolase family 4 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDQ3_THET1 rbh
Glycoside hydrolase family 4 {ECO:0000313|EMBL:ACZ41059.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
glycoside hydrolase family protein
13_1_20cm_4_scaffold_398_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11797..13086
DNA (1290bp) protein (430aa)
Peptidase M16 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE35_CONWI
peptidase M16 domain-containing protein Tax=RBG_16_Actinobacteria_67_10_curated
peptidase M16 domain-containing protein
13_1_20cm_4_scaffold_398_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13083..13688
DNA (606bp) protein (202aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E1Z1_9ACTN
dapB; dihydrodipicolinate reductase
13_1_20cm_4_scaffold_398_15
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13685..14137
DNA (453bp) protein (151aa)
Acetyltransferase n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J1R1_MYCSM
Acetyltransferase {ECO:0000313|EMBL:AGB24196.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
acetyltransferase
13_1_20cm_4_scaffold_398_16

Not on your lists

comp(14113..14544)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=uncultured organism CA37 RepID=E9L1F4_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADU56033.1}; TaxID=941420 species="unclassified sequences; environmental samples.;" source="uncultured organism CA37.;"
GCN5-related N-acetyltransferase
13_1_20cm_4_scaffold_398_17
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14564..15448
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM81_DESK7
Dihydrodipicolinate synthase
13_1_20cm_4_scaffold_398_18
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(15359..17221)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003823607
metal dependent phosphohydrolase Tax=RBG_13_Chloroflexi_56_8_curated
HD domain-containing protein
13_1_20cm_4_scaffold_398_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17316..18974
DNA (1659bp) protein (553aa)
Beta-lactamase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE40_CONWI
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB51656.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
beta-lactamase
13_1_20cm_4_scaffold_398_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18974..19528
DNA (555bp) protein (185aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_398_21
unknown

Not on your lists

comp(19530..19616)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 21 items

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