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13_1_20cm_4_scaffold_4729

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4729_1
unknown

Not on your lists

comp(3..347)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_4_scaffold_4729_2
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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512..1870
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037FDA2B
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACY98669.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curv
helix-turn-helix domain-containing protein
13_1_20cm_4_scaffold_4729_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1867..2754
DNA (888bp) protein (296aa)
3-methyladenine DNA glycosylase; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RBG_16_Actinobacteria_68_12_curated
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0Z0_CONWI
3-methyladenine DNA glycosylase
13_1_20cm_4_scaffold_4729_4
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2751..3254
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369E343
putative phosphatase, C-terminal domain of histone macro H2A1 like protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Appr-1-p processing domain-containing protein
13_1_20cm_4_scaffold_4729_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3383..4204
DNA (822bp) protein (274aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RBG_16_Actinobacteria_67_10_curated
Pyrroline-5-carboxylate reductase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VWX3_9ACTO
pyrroline-5-carboxylate reductase
13_1_20cm_4_scaffold_4729_6
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4201..4884
DNA (684bp) protein (228aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase domain protein n=1 Tax=mine drainage metagenome RepID=T0Z1T4_9ZZZZ
6-phosphogluconolactonase {ECO:0000313|EMBL:KHL11272.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
13_1_20cm_4_scaffold_4729_7
unknown

Not on your lists

4921..5436
DNA (516bp) protein (172aa)
Hypothetical protein
13_1_20cm_4_scaffold_4729_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5437..5616)
DNA (180bp) protein (60aa)
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_4729_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5613..5915)
DNA (303bp) protein (101aa)
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_4729_10

Not on your lists

5999..6565
DNA (567bp) protein (189aa)
Release factor glutamine methyltransferase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6M5_FRAAD
Marine sediment metagenome DNA, contig: S06H3_C02023 {ECO:0000313|EMBL:GAI02081.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
protein-(glutamine-N5) methyltransferase
13_1_20cm_4_scaffold_4729_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6576..7763
DNA (1188bp) protein (396aa)
3-oxoacyl-CoA thiolase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RBG_16_Actinobacteria_67_10_curated
acetyl-CoA acetyltransferase n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003777789
putative fatty acid oxidation complex subunit beta
13_1_20cm_4_scaffold_4729_12
unknown

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comp(8254..8460)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_4_scaffold_4729_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8615..9532
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037535EC
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:ACU75618.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora a
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_4_scaffold_4729_14
unknown

Not on your lists

9532..10119
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_20cm_4_scaffold_4729_15
unknown

Not on your lists

10182..12752
DNA (2571bp) protein (857aa)
hypothetical protein
13_1_20cm_4_scaffold_4729_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12803..14098
DNA (1296bp) protein (432aa)
Cytochrome C biogenesis protein DipZ n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N823_9ACTO
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Tax=RBG_16_Actinobacteria_68_12_curated
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
13_1_20cm_4_scaffold_4729_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14120..14776
DNA (657bp) protein (219aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V2_CONWI rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB54133.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Con
two component transcriptional regulator
13_1_20cm_4_scaffold_4729_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14773..15240
DNA (468bp) protein (156aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1W0_CONWI
integral membrane sensor signal transduction histidine kinase
Displaying 18 items

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