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13_1_20cm_4_scaffold_850

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_850_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..609)
DNA (609bp) protein (203aa)
RNA polymerase sigma 70 n=1 Tax=Patulibacter americanus RepID=UPI0003B5C1FE
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
RpoD subfamily RNA polymerase sigma-70 subunit
13_1_20cm_4_scaffold_850_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(690..1349)
DNA (660bp) protein (220aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI
ECF subfamily RNA polymerase sigma-24 subunit; K03091 RNA polymerase sporulation-specific sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_4_scaffold_850_3
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1520..1930)
DNA (411bp) protein (137aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FCX1_DESAA
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACL06402.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfati
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_4_scaffold_850_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1963..2838)
DNA (876bp) protein (292aa)
Aminoglycoside phosphotransferase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYB9_STRRD rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACZ87129.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangi
aminoglycoside phosphotransferase
13_1_20cm_4_scaffold_850_5
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2864..3424)
DNA (561bp) protein (187aa)
NADPH-dependent FMN reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFG9_CONWI
Putative NADPH-dependent oxidoreductase {ECO:0000313|EMBL:GAF47090.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislavien
NADPH-dependent FMN reductase
13_1_20cm_4_scaffold_850_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3430..3966)
DNA (537bp) protein (179aa)
hypothetical protein, partial n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B41E24
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_850_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4027..4503
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWG7_FRADG
MarR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
MarR family transcriptional regulator
13_1_20cm_4_scaffold_850_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4500..4931)
DNA (432bp) protein (144aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_850_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5019..5729)
DNA (711bp) protein (237aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RBG_16_Actinobacteria_68_12_curated
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F143_CONWI
TrmH family RNA methyltransferase
13_1_20cm_4_scaffold_850_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(5726..6985)
DNA (1260bp) protein (420aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Actinobacteria_67_10_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E1D3_9ACTN
13_1_20cm_4_scaffold_850_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6972..7952)
DNA (981bp) protein (327aa)
Glutamate--tRNA ligase n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BRM5_PUNMI
glutamyl-tRNA synthetase Tax=RBG_16_Actinobacteria_67_10_curated
Glutamyl- and glutaminyl-tRNA synthetase
13_1_20cm_4_scaffold_850_12
unknown

Not on your lists

comp(8032..8403)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_4_scaffold_850_13
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

comp(8425..9783)
DNA (1359bp) protein (453aa)
Uncharacterized transmembrane protein DDB_G0289901 n=1 Tax=Dictyostelium discoideum RepID=Y8625_DICDI
Uncharacterized transmembrane protein DDB_G0289901; Flags: Precursor;; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mo
hypothetical protein
13_1_20cm_4_scaffold_850_14
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9872..11938)
DNA (2067bp) protein (689aa)
Streptococcal hemagglutinin n=2 Tax=Streptococcus sanguinis RepID=F9E196_STRSA
Streptococcal hemagglutinin {ECO:0000313|EMBL:EGQ20389.1}; TaxID=997356 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sanguinis ATCC
hsa; streptococcal hemagglutinin
13_1_20cm_4_scaffold_850_15
Lysinibacillus fusiformis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11941..12432)
DNA (492bp) protein (164aa)
Penicillin-binding protein 1F n=1 Tax=Lysinibacillus fusiformis ZB2 RepID=K9AMW9_9BACI
Penicillin-binding protein 1F {ECO:0000313|EMBL:EFI69740.1}; TaxID=714961 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus fusiformis ZC1.;"
13_1_20cm_4_scaffold_850_16
unknown

Not on your lists

comp(12656..13240)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_20cm_4_scaffold_850_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13331..14056
DNA (726bp) protein (242aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EHN12477.1}; EC=3.2.2.- {ECO:0000313|EMBL:EHN12477.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patuli
A/G-specific adenine glycosylase n=1 Tax=Patulibacter medicamentivorans RepID=H0E1J2_9ACTN
HhH-GPD family protein
13_1_20cm_4_scaffold_850_18
unknown

Not on your lists

14053..14454
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_20cm_4_scaffold_850_19
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14490..15677
DNA (1188bp) protein (396aa)
MFS transporter n=1 Tax=Salinispora arenicola RepID=UPI0003621224 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKA42248.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
major facilitator transporter rbh
13_1_20cm_4_scaffold_850_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15664..16134)
DNA (471bp) protein (157aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RBG_16_Actinobacteria_68_12_curated
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000374A688
13_1_20cm_4_scaffold_850_21
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16131..16934)
DNA (804bp) protein (268aa)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHC4_THEM7
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:ADU50688.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerob
HisJ family histidinol phosphate phosphatase
13_1_20cm_4_scaffold_850_22
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16931..17590)
DNA (660bp) protein (220aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE31A
13_1_20cm_4_scaffold_850_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17587..18243)
DNA (657bp) protein (219aa)
Transcriptional regulator, CarD family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F138_CONWI
BadM/Rrf2 family transcriptional regulator; K07736 CarD family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
BadM/Rrf2 family transcriptional regulator
Displaying 23 items

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