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13_1_20cm_2_scaffold_1119

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1119_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..1179
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WCE2_9SPHN
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_2_scaffold_1119_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1183..1965
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABC8_CARHZ
enoyl-CoA hydratase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
enoyl-CoA hydratase
13_1_20cm_2_scaffold_1119_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1928..2383)
DNA (456bp) protein (152aa)
Phenylacetic acid degradation-related protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX48_RHOP2
phenylacetic acid degradation-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
phenylacetic acid degradation-like protein
13_1_20cm_2_scaffold_1119_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2413..2994)
DNA (582bp) protein (194aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Bacillus methanolicus PB1 RepID=I3DW57_BACMT
ThiJ/PfpI domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ThiJ/PfpI domain-containing protein
13_1_20cm_2_scaffold_1119_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2999..3523)
DNA (525bp) protein (175aa)
Carnitine operon protein CaiE n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J5EHT0_9MYCO
carbonic anhydrase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
carbonic anhydrase
13_1_20cm_2_scaffold_1119_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3593..4618
DNA (1026bp) protein (342aa)
Putative Chalcone and stilbene synthase domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA6_9BACT
Chalcone and stilbene synthase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chalcone and stilbene synthase domain protein
13_1_20cm_2_scaffold_1119_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4650..5408
DNA (759bp) protein (253aa)
Methyltransferase type 11 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2H6_SPHTD
SAM-dependent methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methyltransferase type 11
13_1_20cm_2_scaffold_1119_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5405..6604
DNA (1200bp) protein (400aa)
Putative Electron transfer oxidoreductase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA4_9BACT
Electron transfer oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
monooxygenase FAD-binding protein
13_1_20cm_2_scaffold_1119_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6629..7294
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA8FE3
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
13_1_20cm_2_scaffold_1119_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7333..8784)
DNA (1452bp) protein (484aa)
peptidase M23 n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B6CEE2
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptidase M23
13_1_20cm_2_scaffold_1119_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8814..10685
DNA (1872bp) protein (624aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Strongly similar to NAD(P)H:quinone oxidoreductase chain 5 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWH4_9BACT alias=16ft_combo_ws3_scaffold_1380_24 id=5223700 tax=16ft_combo_ws3 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes
13_1_20cm_2_scaffold_1119_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10691..12235
DNA (1545bp) protein (515aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Similar to NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWH2_9BACT rbh
13_1_20cm_2_scaffold_1119_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12318..13934
DNA (1617bp) protein (539aa)
nuoN-1; NADH dehydrogenase I subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit N n=2 Tax=Geobacter sulfurreducens RepID=D7AE98_GEOSK
nuoN-1; NADH dehydrogenase I subunit N
13_1_20cm_2_scaffold_1119_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13931..14539
DNA (609bp) protein (203aa)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U6C0_OCEP5
had-superfamily hydrolase, subfamily iia; K02566 NagD protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
had-superfamily hydrolase, subfamily iia
13_1_20cm_2_scaffold_1119_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14536..16161
DNA (1626bp) protein (542aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=GWA2_Rokubacteria_73_35_curated
FAD dependent oxidoreductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEN6_THET1
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_1119_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16230..17540
DNA (1311bp) protein (437aa)
glycerol-3-phosphate ABC transporter substrate-binding protein n=1 Tax=Marinobacterium stanieri RepID=UPI000255888F
sn-glycerol 3-phosphate ABC transporter substrate-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
extracellular solute-binding protein
13_1_20cm_2_scaffold_1119_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17557..18438
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMQ9_9RHIZ
ugpA; protein UgpA; K05814 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ugpA; ABC-type sugar transport system, permease components
13_1_20cm_2_scaffold_1119_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18438..19337
DNA (900bp) protein (300aa)
glycerol-3-phosphate transporter membrane protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037B7EB2
ugpE2; sn-glycerol-3-phosphate transport system permease; K05815 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ugpE2; sn-glycerol-3-phosphate transport system permease
13_1_20cm_2_scaffold_1119_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19338..20153
DNA (816bp) protein (272aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A747_9PROT
glycerophosphodiester phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glycerophosphoryl diester phosphodiesterase
13_1_20cm_2_scaffold_1119_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20359..21813
DNA (1455bp) protein (485aa)
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycerol kinase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J3H8_DEIGD
glycerol kinase
13_1_20cm_2_scaffold_1119_21
unknown

Not on your lists

22269..22538
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_2_scaffold_1119_22
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

22541..23296
DNA (756bp) protein (252aa)
ATP synthase subunit A (EC:3.6.3.14) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF3_9BACT
13_1_20cm_2_scaffold_1119_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

23324..23656
DNA (333bp) protein (111aa)
ATP synthase subunit C, membrane-bound, F0 sector; DCCD-binding (EC:3.6.3.14) Tax=GWA2_Rokubacteria_70_23_curated
ATP synthase F0 subcomplex C subunit n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TEM2_CALNY
ATP synthase f0 subcomplex c subunit
13_1_20cm_2_scaffold_1119_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

23763..24374
DNA (612bp) protein (204aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKE0_9BACT
rex; redox-sensing transcriptional repressor rex Tax=GWA2_Rokubacteria_73_35_curated
rex; redox-sensing transcriptional repressor rex
13_1_20cm_2_scaffold_1119_25
Sus scrofa, Sus, Mammalia, Chordata, Metazoa

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24473..25369
DNA (897bp) protein (299aa)
PREDICTED: collagen alpha-1(I) chain-like n=1 Tax=Sus scrofa RepID=UPI0003AED3B9
13_1_20cm_2_scaffold_1119_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

26335..27576
DNA (1242bp) protein (414aa)
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Transcription-repair-coupling factor n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIW0_ANADF
transcription-repair coupling factor
13_1_20cm_2_scaffold_1119_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27573..28589
DNA (1017bp) protein (339aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00036FEBB4
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_20cm_2_scaffold_1119_28
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

28727..30040
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381993F
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
transcription termination factor Rho
13_1_20cm_2_scaffold_1119_29
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


30124..30336
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L222_9FIRM
LSU ribosomal protein L31P Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
LSU ribosomal protein L31P
13_1_20cm_2_scaffold_1119_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

30403..31296
DNA (894bp) protein (298aa)
Peptide chain release factor 1 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI06_9BACT
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
prfA; peptide chain release factor 1
Displaying 30 items

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