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13_1_20cm_2_scaffold_1399

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1399_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..694
DNA (693bp) protein (231aa)
LysR family transcriptional regulator n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036D169A
LysR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
LysR family transcriptional regulator
13_1_20cm_2_scaffold_1399_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

771..1712
DNA (942bp) protein (314aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=GWA2_Rokubacteria_73_35_curated
Selenide, water dikinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C208_SPHTD
selenide, water dikinase
13_1_20cm_2_scaffold_1399_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1702..1971)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031F7200
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_1399_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2079..3143
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003727294
Glycosyl transferase, group 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1
13_1_20cm_2_scaffold_1399_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3140..5233
DNA (2094bp) protein (698aa)
6-carboxyhexanoate-CoA ligase (EC:6.2.1.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
6-carboxyhexanoate-CoA ligase (EC:6.2.1.14)
6-carboxyhexanoate--CoA ligase n=1 Tax=Cupriavidus sp. WS RepID=UPI000377BB0A rbh
13_1_20cm_2_scaffold_1399_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5432..6445
DNA (1014bp) protein (338aa)
MoxR-like ATPases (EC:3.6.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ATPase associated with various cellular activities AAA_3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSB3_9BACT
MoxR-like ATPase
13_1_20cm_2_scaffold_1399_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6461..7918
DNA (1458bp) protein (486aa)
id=3287913 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_1399_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7923..8810
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQL1_ROSCS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_2_scaffold_1399_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8807..13183
DNA (4377bp) protein (1459aa)
Conserved putative chloride channel n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AW90_SYNWW
chloride channel Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
chloride channel
13_1_20cm_2_scaffold_1399_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

13183..14529
DNA (1347bp) protein (449aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VV77_9CYAN
peptidase S1 and S6 chymotrypsin/Hap; K12600 superkiller protein 3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_2_scaffold_1399_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14519..14653)
DNA (135bp) protein (45aa)
Glutaredoxin-like protein, YruB-family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_1399_12
unknown

Not on your lists

comp(14780..15658)
DNA (879bp) protein (293aa)

This feature has no annotations

13_1_20cm_2_scaffold_1399_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15854..17125)
DNA (1272bp) protein (424aa)
gdh; glutamate dehydrogenase (EC:1.4.1.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
gdh; glutamate dehydrogenase (EC:1.4.1.3)
glutamate dehydrogenase n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000371DA56
13_1_20cm_2_scaffold_1399_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17213..17644
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUG0_KORVE
putative transcription factor IscR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
BadM/Rrf2 family transcriptional regulator
13_1_20cm_2_scaffold_1399_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17658..18884
DNA (1227bp) protein (409aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P861_9BACT
13_1_20cm_2_scaffold_1399_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18898..19311
DNA (414bp) protein (138aa)
FeS cluster assembly scaffold IscU n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E73A7
nitrogen fixation protein, NifU-like protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
scaffold protein
13_1_20cm_2_scaffold_1399_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19333..19662
DNA (330bp) protein (110aa)
Iron-sulfur cluster assembly protein IscA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P863_9BACT
iscA; iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iscA; iron-sulfur cluster assembly protein IscA
13_1_20cm_2_scaffold_1399_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19746..20336
DNA (591bp) protein (197aa)
Co-chaperone protein HscB (Hsc20) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P864_9BACT
hscB; co-chaperone protein HscB; K04082 molecular chaperone HscB Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hscB; co-chaperone protein HscB
13_1_20cm_2_scaffold_1399_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20314..22146
DNA (1833bp) protein (611aa)
Chaperone protein HscA (Hsc66) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P865_9BACT
hscA; chaperone protein HscA; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hscA; chaperone protein HscA
13_1_20cm_2_scaffold_1399_20
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

22146..22499
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003770EAF
fdxB; 2Fe-2S ferredoxin; K04755 ferredoxin, 2Fe-2S Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ferredoxin, 2Fe-2S type, ISC system
13_1_20cm_2_scaffold_1399_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22519..22725
DNA (207bp) protein (69aa)
FeS assembly protein IscX n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F203_ACIC5
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
iscX; FeS assembly protein IscX
13_1_20cm_2_scaffold_1399_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(22833..23060)
DNA (228bp) protein (76aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_2_scaffold_1399_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23060..23416)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P976_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_1399_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23421..23744)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P975_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_1399_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

23787..24941
DNA (1155bp) protein (385aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AA22_CARHZ
13_1_20cm_2_scaffold_1399_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

24938..25318
DNA (381bp) protein (127aa)
FeS cluster assembly scaffold protein NifU n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBE8_AMMDK
FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Iron-sulfur cluster assembly scaffold protein
13_1_20cm_2_scaffold_1399_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

25311..25973
DNA (663bp) protein (221aa)
cysE; serine acetyltransferase (EC:2.3.1.30) Tax=GWA2_Rokubacteria_73_35_curated
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA2_9BACT
13_1_20cm_2_scaffold_1399_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

25970..26149
DNA (180bp) protein (60aa)
Excisionase/Xis, DNA-binding protein n=1 Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3JDB2_NITOC
Excisionase/Xis, DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
excisionase
13_1_20cm_2_scaffold_1399_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

26146..26709
DNA (564bp) protein (188aa)
Metal dependent phosphohydrolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTK7_KYRT2
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
metal dependent phosphohydrolase
13_1_20cm_2_scaffold_1399_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26756..27907
DNA (1152bp) protein (384aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJA9_9BACT
Displaying items 1-30 of 33 in total

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