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13_1_20cm_2_scaffold_2354

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2354_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..799
DNA (798bp) protein (266aa)
Putative Tartrate dehydratase beta subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTY8_9PROT
class I fumarate hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
class I fumarate hydratase
13_1_20cm_2_scaffold_2354_2
unknown

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917..1222
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_2_scaffold_2354_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1246..1425
DNA (180bp) protein (60aa)
Redoxin domain protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TKG1_BURSG
Putative thioredoxin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Redoxin domain-containing protein
13_1_20cm_2_scaffold_2354_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1441..1755
DNA (315bp) protein (105aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Sphingobium sp. AP49 RepID=J2WDN7_9SPHN
ccdA; cytochrome c biogenesis protein CcdA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thiol-disulfide isomerase-like thioredoxin
13_1_20cm_2_scaffold_2354_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2387..3229
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376C159
integral membrane sensor signal transduction histidine kinase Tax=GWA2_Rokubacteria_73_35_curated
OmpR family signal transduction histidine kinase
13_1_20cm_2_scaffold_2354_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3222..3902
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003814FA1
OmpR family response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
OmpR family response regulator
13_1_20cm_2_scaffold_2354_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3935..4882
DNA (948bp) protein (316aa)
Exported heme-molybdoenzyme molybdopterin-containing subunit YedY TAT export n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKN5_9BACT
yedY; exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
yedY; exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export
13_1_20cm_2_scaffold_2354_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4890..5540
DNA (651bp) protein (217aa)
Heme-molybdoenzyme heme-containing subunit YedZ cytochrome b subunit n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKN4_9BACT
yedZ; heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
yedZ; heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit
13_1_20cm_2_scaffold_2354_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5584..6930
DNA (1347bp) protein (449aa)
M16B family peptidase (EC:3.4.24.-); K01417 [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
processing peptidase (EC:3.4.24.64)
Putative Zn-dependent peptidase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GL72_9CYAN
13_1_20cm_2_scaffold_2354_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6927..8237
DNA (1311bp) protein (437aa)
processing peptidase (EC:3.4.24.64) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
processing peptidase (EC:3.4.24.64)
Peptidase M16 domain protein n=2 Tax=Arthrospira RepID=K1X6M8_ARTPT
13_1_20cm_2_scaffold_2354_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(8257..8451)
DNA (195bp) protein (65aa)
Tax=CSP1_6_Rokubacteria
13_1_20cm_2_scaffold_2354_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8677..9543
DNA (867bp) protein (289aa)
Putative VacJ-like lipoprotein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8M1_9BACT
putative VacJ-like lipoprotein; K04754 lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative VacJ-like lipoprotein
13_1_20cm_2_scaffold_2354_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9545..10483
DNA (939bp) protein (313aa)
menaquinol oxidoreductase complex ACIII cytochrome C subunit ActA n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B49193
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
putative cytochrome c
13_1_20cm_2_scaffold_2354_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10622..11968
DNA (1347bp) protein (449aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1V3_DESTA alias=16ft_combo_ws3_scaffold_1154_43 id=5223401 tax=16ft_combo_ws3 species=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
sigma-54-dependent transcriptional response regulator
13_1_20cm_2_scaffold_2354_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12231..13826
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Gaeumannomyces graminis var. tritici (strain R3-111a-1) RepID=J3P3J6_GAGT3
Pc22g03720 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
autotransporter-associated beta strand repeat-containing protein
13_1_20cm_2_scaffold_2354_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13864..15426
DNA (1563bp) protein (521aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QLB3_DESB2
Response regulator receiver modulated metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
response regulator receiver modulated metal dependent phosphohydrolase
13_1_20cm_2_scaffold_2354_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15423..15797
DNA (375bp) protein (125aa)
spo0F; stage 0 sporulation protein F (EC:2.7.3.-); K02490 two-component system, response regulator, stage 0 sporulation protein F Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
response regulator receiver n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484287
response regulator receiver protein
13_1_20cm_2_scaffold_2354_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15806..16600
DNA (795bp) protein (265aa)
Methyltransferase type 11 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QPD8_METTR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative methyltransferase
13_1_20cm_2_scaffold_2354_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16604..17410
DNA (807bp) protein (269aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q410_9RHOO
yqeM; methyltransferase domain protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_2354_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17528..18196
DNA (669bp) protein (223aa)
Acetyltransferase n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4ZL16_PAEAL
acetyltransferase, ribosomal protein N-acetylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acetyltransferase, ribosomal protein N-acetylase
13_1_20cm_2_scaffold_2354_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18183..20246
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003771F45
putative two-component hybrid sensor and regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative two-component hybrid sensor and regulator
13_1_20cm_2_scaffold_2354_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20265..22946
DNA (2682bp) protein (894aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IN10_ANADE
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_2354_23
unknown

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23228..23950
DNA (723bp) protein (241aa)

This feature has no annotations

13_1_20cm_2_scaffold_2354_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(24035..24199)
DNA (165bp) protein (55aa)
methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
metH; 5-methyltetrahydrofolate--homocysteine methyltransferase (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Brevibacillus sp. phR RepID=UPI0003675686
Displaying 24 items

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