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13_1_20cm_2_scaffold_30893

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_30893_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..656)
DNA (654bp) protein (218aa)
nuoH_[H]; NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5)
NADH dehydrogenase subunit 1 n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5AA0F
13_1_20cm_2_scaffold_30893_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(653..2290)
DNA (1638bp) protein (546aa)
NADH dehydrogenase subunit G n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B681AB
Molybdopterin oxidoreductase Fe4S4 region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin oxidoreductase Fe4S4 region
13_1_20cm_2_scaffold_30893_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2283..2867)
DNA (585bp) protein (195aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nuoF; NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I, chain F) (NDH-1, chain F) (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase F subunit (51 kDa) n=1 Tax=uncultured bacterium RepID=D6CJW2_9BACT
13_1_20cm_2_scaffold_30893_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3501..3887)
DNA (387bp) protein (129aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nuoE; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EX84_SORC5
13_1_20cm_2_scaffold_30893_5
unknown

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4219..4542
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_2_scaffold_30893_6
unknown

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4654..4917
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_30893_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4960..5070
DNA (111bp) protein (37aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_20cm_2_scaffold_30893_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5360..5857)
DNA (498bp) protein (166aa)
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADH dehydrogenase subunit C n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B64C63
NADH (or F420H2) dehydrogenase subunit C
13_1_20cm_2_scaffold_30893_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5857..6315)
DNA (459bp) protein (153aa)
nuoB; NADH dehydrogenase subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH dehydrogenase subunit B n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3F63A
13_1_20cm_2_scaffold_30893_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6306..6635)
DNA (330bp) protein (110aa)
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3)
NADH:ubiquinone oxidoreductase subunit A n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B54E6D
13_1_20cm_2_scaffold_30893_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6653..7648)
DNA (996bp) protein (332aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D3_GEMAT
13_1_20cm_2_scaffold_30893_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7712..8284)
DNA (573bp) protein (191aa)
Putative transcriptional regulator n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0K177_9FIRM
XRE family transcriptional regulator Tax=CSP1_6_Rokubacteria
XRE family transcriptional regulator
13_1_20cm_2_scaffold_30893_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(8281..8619)
DNA (339bp) protein (113aa)
putative 2Fe-2S ferredoxin; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] Tax=CSP1_2_Dadabacteria
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAU4_SINAD
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
13_1_20cm_2_scaffold_30893_14
unknown

Not on your lists

comp(9256..9855)
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_20cm_2_scaffold_30893_trna_1
unknown

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comp(10340..10421)
DNA (82bp)
transferRNA
Displaying 15 items

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