ggKbase home page

13_1_40cm_2_scaffold_4176

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4176_1

Not on your lists

1..273
DNA (273bp) protein (91aa)
Translation initiation factor SUI1 domain protein n=1 Tax=mine drainage metagenome RepID=T1BVP1_9ZZZZ
Translation initiation factor SUI1 domain protein {ECO:0000313|EMBL:EQD77021.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;
translation initiation factor SUI1
13_1_40cm_2_scaffold_4176_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(330..791)
DNA (462bp) protein (154aa)
Blue (Type1) copper domain-containing protein n=2 Tax=Nitrosopumilus RepID=K0BAA4_9ARCH
blue (Type 1) copper domain-containing protein Tax=RBG_16_Thaumarchaeota_49_8_curated
blue (type1) copper domain-containing protein
13_1_40cm_2_scaffold_4176_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(914..1387)
DNA (474bp) protein (158aa)
Putative multicopper oxidase type 3 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INR1_NITGG
blue (Type 1) copper domain-containing protein Tax=RBG_16_Thaumarchaeota_49_8_curated
multicopper oxidase type 3
13_1_40cm_2_scaffold_4176_4
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1512..2495
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K3D6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB38628.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
13_1_40cm_2_scaffold_4176_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2498..4390
DNA (1893bp) protein (631aa)
gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEH38475.1}; EC=1.1.99.3 {ECO:0000313|EMBL:AEH38475.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD02_HALXS
13_1_40cm_2_scaffold_4176_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

4424..5032
DNA (609bp) protein (203aa)
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_2_scaffold_4176_7
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

5044..6636
DNA (1593bp) protein (531aa)
Thermosome subunit n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKQ8_ACIS0
thermosome subunit
Thermosome subunit {ECO:0000313|EMBL:AGB05312.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
13_1_40cm_2_scaffold_4176_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6886..8856
DNA (1971bp) protein (657aa)
korA; 2-oxoglutarate synthase subunit alpha (EC:1.2.7.3)
2-oxoglutarate synthase subunit alpha {ECO:0000313|EMBL:AFU59775.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AFU59775.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitr
2-oxoglutarate synthase subunit alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIN1_NITGG
13_1_40cm_2_scaffold_4176_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10230..10883
DNA (654bp) protein (218aa)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:AIF83305.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AIF83305.1};; TaxID=1459636 species="Archaea; Thaumarchae
2-oxoglutarate synthase subunit beta n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEJ8_NITGG
13_1_40cm_2_scaffold_4176_10
unknown

Not on your lists

comp(10934..11497)
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_2_scaffold_4176_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11626..12066)
DNA (441bp) protein (147aa)
methyladenine glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=RBG_16_Armatimonadetes_67_12_curated
DNA-3-methyladenine glycosylase I n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GJD0_9NEIS
hypothetical protein
13_1_40cm_2_scaffold_4176_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

12225..12863
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IME5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60197.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_2_scaffold_4176_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13056..13799
DNA (744bp) protein (248aa)
Putative serine protease DO-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL74_NITGG
serine protease DO-like protein
Putative serine protease DO-like protein {ECO:0000313|EMBL:AFU60198.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_2_scaffold_4176_14
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14113..15363)
DNA (1251bp) protein (417aa)
Pro-kumamolisin, activation protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LRH4_9EURY
Pro-kumamolisin, activation protein {ECO:0000313|EMBL:EQB66798.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales a
hypothetical protein
13_1_40cm_2_scaffold_4176_15
unknown

Not on your lists

15490..16275
DNA (786bp) protein (262aa)

This feature has no annotations

13_1_40cm_2_scaffold_4176_16
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

16464..16946
DNA (483bp) protein (161aa)
Marine sediment metagenome DNA, contig: S01H1_S41057 Tax=RBG_16_Bathyarchaeota_57_9_curated
13_1_40cm_2_scaffold_4176_17

Not on your lists

comp(17027..17446)
DNA (420bp) protein (140aa)
Putative histidine triad protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN38_NITGG
Histidine triad (HIT) protein (Hit) {ECO:0000313|EMBL:AIE95841.1}; TaxID=1455934 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_70_G10.;"
histidine triad protein
13_1_40cm_2_scaffold_4176_18
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17439..17978)
DNA (540bp) protein (180aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUR4_ROSS1
ATP--cobalamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABQ90367.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ro
13_1_40cm_2_scaffold_4176_19
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17978..18391)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1U0_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI62662.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola
Displaying 19 items

View Taxonomy