ggKbase home page

13_1_40cm_2_scaffold_5308

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5308_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..755
DNA (753bp) protein (251aa)
Glycoside hydrolase family 57 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6K7_ANADF
glycoside hydrolase
Glycoside hydrolase family 57 {ECO:0000313|EMBL:ABS24353.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
13_1_40cm_2_scaffold_5308_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

752..2833
DNA (2082bp) protein (694aa)
alpha-amylase (EC:3.2.1.1)
4-alpha-glucanotransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YXJ0_9BACT
alpha-amylase/alpha-mannosidase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_1_40cm_2_scaffold_5308_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

2847..3908
DNA (1062bp) protein (354aa)
galactose-1-phosphate uridyl transferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) (EC:2.7.7.12) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Galactose-1-phosphate uridylyltransferase id=3982146 bin=GWC2_Deltaproteobacteria_56_8 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
galactose-1-phosphate uridylyltransferase
13_1_40cm_2_scaffold_5308_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

3923..5383
DNA (1461bp) protein (487aa)
glycogen/starch synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Glycogen synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C97_SOLUE
glycogen/starch synthase
13_1_40cm_2_scaffold_5308_5
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5399..7558)
DNA (2160bp) protein (720aa)
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNT2_9PLAN
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EAQ81980.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellul
13_1_40cm_2_scaffold_5308_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7697..7981
DNA (285bp) protein (95aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_2_scaffold_5308_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8038..9432
DNA (1395bp) protein (465aa)
NADH dehydrogenase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MEP9_CORCM rbh
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG89416.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KB
13_1_40cm_2_scaffold_5308_8
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9526..10092
DNA (567bp) protein (189aa)
ECF subfamily RNA polymerase sigma-24 factor Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
RNA polymerase, sigma-24 subunit, RpoE
RNA polymerase sigma-E factor id=1709623 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_5308_9
unknown

Not on your lists

10105..10947
DNA (843bp) protein (281aa)

This feature has no annotations

13_1_40cm_2_scaffold_5308_10
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10944..11519
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AX6_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
13_1_40cm_2_scaffold_5308_11
unknown

Not on your lists

12022..13017
DNA (996bp) protein (332aa)

This feature has no annotations

13_1_40cm_2_scaffold_5308_12

Not on your lists

comp(13523..13999)
DNA (477bp) protein (159aa)
Marine sediment metagenome DNA, contig: S01H4_S08711 {ECO:0000313|EMBL:GAG97391.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_5308_13
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

14340..14870
DNA (531bp) protein (177aa)
serine/threonine protein kinase id=17241164 bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonine protein kinase Tax=RBG_16_Aminicenantes_66_30_curated
serine/threonine protein kinase
13_1_40cm_2_scaffold_5308_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

14858..15790
DNA (933bp) protein (311aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 14 items

View Taxonomy