ggKbase home page

13_1_40cm_2_scaffold_598

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_598_1
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..711
DNA (711bp) protein (237aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3S9W4_9BACL
13_1_40cm_2_scaffold_598_2
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

731..2014
DNA (1284bp) protein (428aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BBB9_MEISD rbh
adenosylhomocysteinase
13_1_40cm_2_scaffold_598_3
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

2055..5150
DNA (3096bp) protein (1032aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LER8_SYNFM
type I phosphodiesterase/nucleotide pyrophosphatase Tax=CG_Bacteroid_01
type I phosphodiesterase/nucleotide pyrophosphatase
13_1_40cm_2_scaffold_598_4
unknown

Not on your lists

5147..6088
DNA (942bp) protein (314aa)

This feature has no annotations

13_1_40cm_2_scaffold_598_5
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(6119..8824)
DNA (2706bp) protein (902aa)
YjgP/YjgQ family protein id=16853598 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
YjgP/YjgQ family protein Tax=RBG_16_Aminicenantes_63_16_curated
permease, YjgP/YjgQ family
13_1_40cm_2_scaffold_598_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9073..9858)
DNA (786bp) protein (262aa)
ParB-like partition protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEN8_CHLTF
ParB-like partition protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ParB-like partition protein
13_1_40cm_2_scaffold_598_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9887..10642)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=uncultured bacterium F39-01 RepID=I3VIC3_9BACT
chromosome partitioning ATPase; K03496 chromosome partitioning protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
chromosome partitioning ATPase
13_1_40cm_2_scaffold_598_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10852..11337)
DNA (486bp) protein (162aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=8266104 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
13_1_40cm_2_scaffold_598_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(11390..12721)
DNA (1332bp) protein (444aa)
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=14628041 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB
13_1_40cm_2_scaffold_598_10

Not on your lists

comp(12718..13278)
DNA (561bp) protein (187aa)
Histidine triad protein n=1 Tax=uncultured prokaryote RepID=H5SL70_9ZZZZ
Histidine triad protein {ECO:0000313|EMBL:BAL56906.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
histidine triad (HIT) protein
13_1_40cm_2_scaffold_598_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13325..13657)
DNA (333bp) protein (111aa)
Integration host factor, beta subunit, putative n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI39_9BACT
nucleoid DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
histone family protein DNA-binding protein
13_1_40cm_2_scaffold_598_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(13723..15633)
DNA (1911bp) protein (637aa)
30S ribosomal protein S1 n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI38_9BACT
SSU ribosomal protein S1P; K02945 small subunit ribosomal protein S1 Tax=RBG_16_Acidobacteria_70_10_curated
rpsA; 30S ribosomal protein S1
13_1_40cm_2_scaffold_598_13
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(15798..16925)
DNA (1128bp) protein (376aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase id=4574737 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
13_1_40cm_2_scaffold_598_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16922..17686)
DNA (765bp) protein (255aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source=
Pseudouridine synthase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7X1_AMMDK
pseudouridine synthase
13_1_40cm_2_scaffold_598_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17643..18383)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI35_9BACT
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RBG_16_Acidobacteria_70_10_curated
condensin subunit ScpB
13_1_40cm_2_scaffold_598_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(18376..19197)
DNA (822bp) protein (274aa)
scpA; chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Segregation and condensation protein A id=1880852 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
scpA; chromosome segregation and condensation protein ScpA
13_1_40cm_2_scaffold_598_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(19194..20150)
DNA (957bp) protein (319aa)
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2) id=14429459 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
13_1_40cm_2_scaffold_598_18
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(20222..20485)
DNA (264bp) protein (88aa)
Tax=RBG_13_OP8X_37_8_curated
13_1_40cm_2_scaffold_598_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(20494..21945)
DNA (1452bp) protein (484aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein id=14429484 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
13_1_40cm_2_scaffold_598_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21956..22852)
DNA (897bp) protein (299aa)
cyclic nucleotide-binding domain-containing protein Tax=RBG_16_Acidobacteria_70_10_curated
Cyclic nucleotide-binding domain-containing protein id=4715000 bin=GWC2_Nitrospirae-rel_56_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
cyclic nucleotide-binding domain-containing protein
13_1_40cm_2_scaffold_598_21
bacterium UASB270, Bacteria

Not on your lists

23029..25407
DNA (2379bp) protein (793aa)
Peptidase M23 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0B7_EMTOG
Peptidase family M23 {ECO:0000313|EMBL:GAK55995.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Peptidase M23
13_1_40cm_2_scaffold_598_22
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(25418..28408)
DNA (2991bp) protein (997aa)
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) (EC:2.7.7.42)
Putative Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN18_9BACT
13_1_40cm_2_scaffold_598_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(28483..29286)
DNA (804bp) protein (268aa)
L-glutamine synthetase (EC:6.3.1.2)
L-glutamine synthetase {ECO:0000313|EMBL:ABJ81083.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ABJ81083.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatu
L-glutamine synthetase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CY3_SOLUE
13_1_40cm_2_scaffold_598_24
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30224..30883
DNA (660bp) protein (220aa)
AMMECR1 domain-containing protein; K06990 Tax=CG_Syntroph_01
AMMECR1 domain-containing protein; K06990 id=7201095 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
AMMECR1 family protein
13_1_40cm_2_scaffold_598_25
unknown

Not on your lists

comp(30840..31256)
DNA (417bp) protein (139aa)

This feature has no annotations

Displaying 25 items

View Taxonomy