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13_1_40cm_3_scaffold_1959

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1959_1
RLO_RIF05_58_11, RIF5, Bacteria

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comp(1..378)
DNA (378bp) protein (126aa)
putative two-component sensor protein/histidine protein kinase Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
response regulator receiver protein id=14430354 bin=bin3_NC10 species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
two component system response regulator, modulated diguanylate cyclase
13_1_40cm_3_scaffold_1959_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(375..647)
DNA (273bp) protein (91aa)
Putative two-component system, OmpR family,sensor kinase {ECO:0000313|EMBL:CDQ10966.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae;
Sensor histidine kinase response receiver, HAMP domain-containing id=4116099 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
two-component system, OmpR family, sensor kinase
13_1_40cm_3_scaffold_1959_3
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(625..2970)
DNA (2346bp) protein (782aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Broc
integral membrane sensor hybrid histidine kinase (EC:2.7.13.3)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IJN9_9PLAN
13_1_40cm_3_scaffold_1959_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(2936..4774)
DNA (1839bp) protein (613aa)
protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036721C3
hypothetical protein
13_1_40cm_3_scaffold_1959_5
unknown

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comp(4771..4935)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_3_scaffold_1959_6
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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comp(5058..6749)
DNA (1692bp) protein (564aa)
putative signaling protein Tax=RBG_16_Chloroflexi_64_43_curated
putative PAS/PAC sensor protein id=24531793 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative PAS/PAC sensor protein
13_1_40cm_3_scaffold_1959_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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6827..7102
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMN5_9CHLR
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1959_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7099..7566
DNA (468bp) protein (156aa)
MOSC domain containing protein n=1 Tax=Halogranum salarium B-1 RepID=J3A365_9EURY
MOSC domain containing protein {ECO:0000313|EMBL:EJN59793.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
MOSC domain-containing protein
13_1_40cm_3_scaffold_1959_9
unknown

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comp(7570..7872)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_3_scaffold_1959_10
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7936..8565
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036E4815
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ64466.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatos
hypothetical protein
13_1_40cm_3_scaffold_1959_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(8643..9644)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
Putative uncharacterized protein id=2487474 bin=GWC2_Chloroflexi_73_18 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
protein of unknown function DUF72
13_1_40cm_3_scaffold_1959_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(9649..9993)
DNA (345bp) protein (115aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5S0_9CHLR
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EFH80331.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
hypothetical protein
13_1_40cm_3_scaffold_1959_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10014..10541)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000368E3F9
Trehalose synthase {ECO:0000313|EMBL:AKF05899.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus
treT; Trehalose synthase
13_1_40cm_3_scaffold_1959_14
unknown

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10631..11095
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_3_scaffold_1959_15
unknown

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comp(11408..11770)
DNA (363bp) protein (121aa)

This feature has no annotations

Displaying 15 items

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