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13_1_40cm_3_scaffold_2957

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2957_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(3..848)
DNA (846bp) protein (282aa)
panE; 2-dehydropantoate 2-reductase (EC:1.1.1.169) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003656C04
2-dehydropantoate 2-reductase
13_1_40cm_3_scaffold_2957_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(845..2374)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035E6523 rbh
AMP-dependent synthetase {ECO:0000313|EMBL:KFA91020.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="C
Acyl-CoA synthetase family protein
13_1_40cm_3_scaffold_2957_3
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2404..2781)
DNA (378bp) protein (126aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ABM97311.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ABM97311.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;"
2-hydroxyisobutyryl-CoA mutase large subunit n=2 Tax=Aquincola tertiaricarbonis RepID=I3VE77_9BURK
13_1_40cm_3_scaffold_2957_4

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comp(2778..4034)
DNA (1257bp) protein (419aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:CBH97834.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH97834.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;"
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=mine drainage metagenome RepID=E6PSC7_9ZZZZ
13_1_40cm_3_scaffold_2957_5

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comp(4031..4996)
DNA (966bp) protein (322aa)
Membrane ATPase/protein kinase n=1 Tax=mine drainage metagenome RepID=E6PSC8_9ZZZZ
Membrane ATPase/protein kinase {ECO:0000313|EMBL:CBH97835.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LAO/AO transport system ATPase
13_1_40cm_3_scaffold_2957_6

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comp(4993..5346)
DNA (354bp) protein (118aa)
Phenylacetate--CoA ligase n=1 Tax=mine drainage metagenome RepID=E6PSC9_9ZZZZ
Phenylacetate--CoA ligase {ECO:0000313|EMBL:CBH97836.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phenylacetate--CoA ligase
13_1_40cm_3_scaffold_2957_7
unknown

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5778..6080
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_3_scaffold_2957_8
R_Proteobacteria_53_8, Proteobacteria, Bacteria

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comp(6409..6816)
DNA (408bp) protein (136aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
Cobalamin B12-binding domain protein n=1 Tax=mine drainage metagenome RepID=E6PSD0_9ZZZZ
cobalamin B12-binding domain-containing protein
13_1_40cm_3_scaffold_2957_9

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6958..7725
DNA (768bp) protein (256aa)
Transcriptional regulator-like protein protein n=1 Tax=mine drainage metagenome RepID=E6PSC3_9ZZZZ
Transcriptional regulator-like protein protein {ECO:0000313|EMBL:CBH97830.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GntR family transcriptional regulator
13_1_40cm_3_scaffold_2957_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7736..8185
DNA (450bp) protein (150aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JED3_ANAD2
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding {ECO:0000313|EMBL:ACL64259.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobact
13_1_40cm_3_scaffold_2957_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8340..9467
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI000361D525 rbh
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=RBG_16_Anaeromyxobacter_69_14_curated
amino acid ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_2957_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9468..10346
DNA (879bp) protein (293aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCX7_INTC7 rbh
amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
amino acid ABC transporter
13_1_40cm_3_scaffold_2957_13
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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10350..11222
DNA (873bp) protein (291aa)
Putative amino-acid transmembrane ABC transporter protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACH0_COLFT
putative amino-acid transmembrane ABC transporter protein; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Gallionellales_56_9_curated
livM; Branched-chain amino acid transport system permease protein LivM
13_1_40cm_3_scaffold_2957_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11219..11977
DNA (759bp) protein (253aa)
ABC transporter related n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEI8_METS4
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
ABC transporter-like protein
13_1_40cm_3_scaffold_2957_15
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11974..12711
DNA (738bp) protein (246aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCI9_9FIRM
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F); K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Anaeromyxobacter_69_14_cur
branched-chain amino acid transporter ATP-binding protein
13_1_40cm_3_scaffold_2957_16
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12717..13868
DNA (1152bp) protein (384aa)
malate/L-lactate dehydrogenase (EC:1.1.1.-)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EB4642 rbh
Dehydrogenase {ECO:0000313|EMBL:ESH92413.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
13_1_40cm_3_scaffold_2957_17
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13784..14449)
DNA (666bp) protein (222aa)
pilz-like type IV pilus assembly protein; K02676 type IV pilus assembly protein PilZ Tax=RBG_13_Deltaproteobacteria_61_14_curated
13_1_40cm_3_scaffold_2957_18
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14718..14909)
DNA (192bp) protein (64aa)
Cold-shock DNA-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UMR5_ANASK
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACG74511.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_3_scaffold_2957_19
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14994..15380)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N006_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE04208.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_3_scaffold_2957_20
Myotis lucifugus, Myotis, Chiroptera, Mammalia, Chordata, Metazoa

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comp(15413..16276)
DNA (864bp) protein (288aa)
PREDICTED: protein SON isoform X6 n=1 Tax=Myotis brandtii RepID=UPI0003BB9AAD
Uncharacterized protein {ECO:0000313|Ensembl:ENSMLUP00000002235}; TaxID=59463 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera;
hypothetical protein
13_1_40cm_3_scaffold_2957_21
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16292..17896)
DNA (1605bp) protein (535aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:CDY78314.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CDY78314.1};; Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KDR40054.1}; TaxID=60547 species=
acetolactate synthase 2 catalytic subunit n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A2B7F rbh
thiamine pyrophosphate enzyme domain protein TPP-binding protein
Displaying 21 items

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