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13_1_40cm_3_scaffold_1709

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1709_1
unknown

Not on your lists

comp(807..995)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_3_scaffold_1709_2
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1099..1770)
DNA (672bp) protein (224aa)
protein kinase (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z089_9BACT
hypothetical protein Tax=RBG_16_Betaproteobacteria_56_24_curated
13_1_40cm_3_scaffold_1709_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1767..2279)
DNA (513bp) protein (171aa)
SsrA-binding protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7F3_9BACT
smpB; ssrA-binding protein; K03664 SsrA-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
smpB; ssrA-binding protein
13_1_40cm_3_scaffold_1709_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2549..3064
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7F2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1709_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3033..3641)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7F1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1709_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


comp(3689..6184)
DNA (2496bp) protein (832aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7F0_9BACT rbh
13_1_40cm_3_scaffold_1709_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6529..10353)
DNA (3825bp) protein (1275aa)
DNA gyrase subunit B Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
DNA gyrase subunit B id=4424975 bin=GWC2_OP3_44_8 species=Rivularia sp. PCC 7116 genus=Rivularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 rbh
gyrB; DNA gyrase B subunit
13_1_40cm_3_scaffold_1709_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10358..10858)
DNA (501bp) protein (167aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7E8_9BACT
13_1_40cm_3_scaffold_1709_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10819..11424)
DNA (606bp) protein (202aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7E8_9BACT
13_1_40cm_3_scaffold_1709_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11452..12789)
DNA (1338bp) protein (446aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7E7_9BACT rbh
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
dnaA; chromosomal replication initiator protein DnaA
13_1_40cm_3_scaffold_1709_11
unknown

Not on your lists

comp(13151..13423)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_1709_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13429..13773)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P976_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1709_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13795..14139)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P975_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK44057.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_1709_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


comp(14237..15493)
DNA (1257bp) protein (419aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P974_9BACT rbh
13_1_40cm_3_scaffold_1709_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15683..17128
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P973_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1709_16
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

17192..17692
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034D73A9
Membrane protein {ECO:0000313|EMBL:KIY10654.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
13_1_40cm_3_scaffold_1709_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17763..18797
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P972_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
Displaying 17 items

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