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13_1_40cm_3_scaffold_374

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_374_1
unknown

Not on your lists

comp(3..410)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_3_scaffold_374_2
unknown

Not on your lists

comp(515..1435)
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_40cm_3_scaffold_374_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1473..1931)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDZ6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_374_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1967..3142)
DNA (1176bp) protein (392aa)
phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=DEOB_MOOTA
13_1_40cm_3_scaffold_374_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3255..5681)
DNA (2427bp) protein (809aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDW5_9GAMM rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_374_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5716..6792)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDY3_9BACT
hypothetical protein; K07082 UPF0755 protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_374_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6789..7250)
DNA (462bp) protein (154aa)
yqgF; putative holliday junction resolvase (EC:3.1.-.-); K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
yqgF; putative holliday junction resolvase (EC:3.1.-.-)
Predicted Holliday junction resolvase (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDY2_9BACT
13_1_40cm_3_scaffold_374_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


comp(7255..9903)
DNA (2649bp) protein (883aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDY1_9BACT rbh
13_1_40cm_3_scaffold_374_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9900..10412)
DNA (513bp) protein (171aa)
Regulatory protein RecX n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDY0_9BACT
putative regulatory protein RecX; K03565 regulatory protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative regulatory protein RecX
13_1_40cm_3_scaffold_374_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(10448..11557)
DNA (1110bp) protein (370aa)
Protein RecA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDX9_9BACT rbh
recA; recombinase recA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=330214 species="Bacteria; Nitrospir
13_1_40cm_3_scaffold_374_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11678..12328)
DNA (651bp) protein (217aa)
putative 2'-5' RNA ligase (EC:6.5.1.-); K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative 2'-5' RNA ligase (EC:6.5.1.-)
Putative 2'-5' RNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN7_9BACT
13_1_40cm_3_scaffold_374_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12295..13542)
DNA (1248bp) protein (416aa)
CinA-like protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN8_9BACT rbh
cinA; CinA-like protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
cinA; CinA-like protein
13_1_40cm_3_scaffold_374_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13623..14243)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42776.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_374_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14454..15161
DNA (708bp) protein (236aa)
cld2; chlorite dismutase (EC:1.13.11.49)
Chlorite dismutase {ECO:0000313|EMBL:CBK42777.1}; EC=1.13.11.49 {ECO:0000313|EMBL:CBK42777.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candid
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35 rbh
13_1_40cm_3_scaffold_374_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15315..15962
DNA (648bp) protein (216aa)
membrane protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC34
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_374_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16043..16255
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHP2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42779.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_374_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16289..17467
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHP3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_374_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17555..17968
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHP4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42781.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_374_trna_1
unknown

Not on your lists

18109..18181
DNA (73bp)
transferRNA
Displaying 19 items

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