ggKbase home page

13_2_20cm_scaffold_446

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_446_1
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

393..941
DNA (549bp) protein (183aa)
Putative membrane protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L074_FRAAD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFC87112.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia
13_2_20cm_scaffold_446_2
unknown

Not on your lists

981..1511
DNA (531bp) protein (177aa)

This feature has no annotations

13_2_20cm_scaffold_446_3

Not on your lists

1610..2521
DNA (912bp) protein (304aa)
TPR repeat-containing protein n=1 Tax=uncultured bacterium 253 RepID=E3T735_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_446_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2561..2722
DNA (162bp) protein (54aa)
Pyrimidine utilization protein C id=1782158 bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces sp. C genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
endoribonuclease L-PSP Tax=GWD2_Deltaproteobacteria_55_8_curated
endoribonuclease L-PSP
13_2_20cm_scaffold_446_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3395..3808
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003155AFD
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AIF48718.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_2_20cm_scaffold_446_6

Not on your lists

3962..4453
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYK3_SORCE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49105.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_446_7
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

4579..5010
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4F6_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
membrane protein
13_2_20cm_scaffold_446_8
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..5593
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KN25_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC03330.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
protein of hypothetical function duf1801
13_2_20cm_scaffold_446_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5586..5918
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD01_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62347.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_2_20cm_scaffold_446_10
unknown

Not on your lists

6017..6247
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_446_11
Lysobacter sp. ATCC 53042, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6627..7727
DNA (1101bp) protein (367aa)
Mg2+ transporter protein CorA family protein n=1 Tax=Lysobacter sp. ATCC 53042 RepID=F8TUC1_9GAMM rbh
Mg2+ transporter protein CorA family protein {ECO:0000313|EMBL:AEH59033.1}; TaxID=324869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source
Mg2+ transporter protein, CorA-like
13_2_20cm_scaffold_446_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7747..8181
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY15937.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_446_13
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(8305..8598)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQX2_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77870.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-
13_2_20cm_scaffold_446_14
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8864..9229)
DNA (366bp) protein (122aa)
Cold-shock DNA-binding domain protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YID3_HALP7
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AFZ45868.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothe
13_2_20cm_scaffold_446_15
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9371..9838)
DNA (468bp) protein (156aa)
hypothetical protein
Putative uncharacterized protein id=4719063 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=BJP_IG2158_Nitrospirales_45_240
13_2_20cm_scaffold_446_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9957..12185)
DNA (2229bp) protein (743aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" so
Glycogen debranching enzyme GlgX n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7P8_9BACT
glycogen debranching enzyme GlgX
13_2_20cm_scaffold_446_17
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12300..12827
DNA (528bp) protein (176aa)
Lipoprotein, putative n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AJY9_GEOSK
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:AJY71986.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurredu
13_2_20cm_scaffold_446_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12927..13340)
DNA (414bp) protein (138aa)
Amino acid-binding ACT domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7P7_9BACT
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:EDY17537.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Amino acid-binding ACT domain protein
13_2_20cm_scaffold_446_19
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13506..14918
DNA (1413bp) protein (471aa)
Amino acid permease-associated protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B5T2_9RHIZ
amino acid permease-associated protein
Amino acid permease-associated protein {ECO:0000313|EMBL:AGK57577.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyp
13_2_20cm_scaffold_446_20
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14915..16153
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000375155B
Signal peptide protein {ECO:0000313|EMBL:KJC38123.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
signal peptide protein
Displaying 20 items

View Taxonomy