ggKbase home page

13_2_20cm_scaffold_751

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_751_1
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(3..1415)
DNA (1413bp) protein (471aa)
MucD; K01362 [EC:3.4.21.-] Tax=RBG_13_Nitrospirae_39_12_curated
MucD id=3240418 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
serine protease MucD
13_2_20cm_scaffold_751_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1415..3577)
DNA (2163bp) protein (721aa)
ATP-dependent DNA helicase RecG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2B7_9BACT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDY19357.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DEAD/DEAH box helicase
13_2_20cm_scaffold_751_3
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3574..5406)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI0003814089 rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDD98004.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; envir
single-stranded-DNA-specific exonuclease RecJ
13_2_20cm_scaffold_751_4
unknown

Not on your lists

5796..6626
DNA (831bp) protein (277aa)

This feature has no annotations

13_2_20cm_scaffold_751_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7102..8247)
DNA (1146bp) protein (382aa)
Radical SAM domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR8_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EDY21860.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH or related uncharacterized enzyme
13_2_20cm_scaffold_751_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8507..9109
DNA (603bp) protein (201aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ECF subfamily RNA polymerase sigma-24 subunit
13_2_20cm_scaffold_751_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9189..9602)
DNA (414bp) protein (138aa)
hypothetical protein id=14625221 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_2_20cm_scaffold_751_8
unknown

Not on your lists

comp(9633..9899)
DNA (267bp) protein (89aa)

This feature has no annotations

13_2_20cm_scaffold_751_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10084..10338
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D097_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20411.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_751_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(10313..10924)
DNA (612bp) protein (204aa)
30S ribosomal protein S4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ7_9BACT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S4
13_2_20cm_scaffold_751_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(10964..11575)
DNA (612bp) protein (204aa)
30S ribosomal protein S11 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ6_9BACT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S11
13_2_20cm_scaffold_751_12
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(11592..11987)
DNA (396bp) protein (132aa)
30S ribosomal protein S13 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ5_9BACT
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
rpsM; 30S ribosomal protein S13
13_2_20cm_scaffold_751_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12349..13125)
DNA (777bp) protein (259aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ3_9BACT
map; methionine aminopeptidase
13_2_20cm_scaffold_751_14
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13122..13721)
DNA (600bp) protein (200aa)
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=GWF1_Rhodobacteraceae_65_7_curated
adenylate kinase n=1 Tax=Thioalkalivibrio RepID=UPI00037297C6
hypothetical protein
13_2_20cm_scaffold_751_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(13782..15290)
DNA (1509bp) protein (503aa)
Protein translocase subunit SecY n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ2_9BACT rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus
secY; preprotein translocase subunit SecY
13_2_20cm_scaffold_751_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(15323..15898)
DNA (576bp) protein (192aa)
50S ribosomal protein L15 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ1_9BACT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
rplO; 50S ribosomal protein L15
13_2_20cm_scaffold_751_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(15882..16412)
DNA (531bp) protein (177aa)
30S ribosomal protein S5 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ0_9BACT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fla
30S ribosomal protein S5
13_2_20cm_scaffold_751_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(16452..16757)
DNA (306bp) protein (102aa)
50S ribosomal protein L18 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY9_9BACT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rplR; 50S ribosomal protein L18
13_2_20cm_scaffold_751_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(16817..17356)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY8_9BACT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fla
rplF; 50S ribosomal protein L6
13_2_20cm_scaffold_751_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(17395..17793)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY7_9BACT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S8
13_2_20cm_scaffold_751_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(17799..18371)
DNA (573bp) protein (191aa)
50S ribosomal protein L5 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY6_9BACT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fla
rplE; 50S ribosomal protein L5
13_2_20cm_scaffold_751_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(18425..18727)
DNA (303bp) protein (101aa)
50S ribosomal protein L24 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY5_9BACT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rplX; 50S ribosomal protein L24
13_2_20cm_scaffold_751_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(18724..19089)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY4_9BACT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
rplN; 50S ribosomal protein L14
13_2_20cm_scaffold_751_24
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(19101..19388)
DNA (288bp) protein (96aa)
30S ribosomal protein S17 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY3_9BACT
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
30S ribosomal protein S17
13_2_20cm_scaffold_751_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(19391..19594)
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY2_9BACT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
50S ribosomal protein L29
13_2_20cm_scaffold_751_26
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(19600..20025)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY1_9BACT
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
rplP; 50S ribosomal protein L16
13_2_20cm_scaffold_751_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(20038..20730)
DNA (693bp) protein (231aa)
30S ribosomal protein S3 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY0_9BACT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S3
13_2_20cm_scaffold_751_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(20748..21233)
DNA (486bp) protein (162aa)
50S ribosomal protein L22 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUX9_9BACT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
50S ribosomal protein L22
13_2_20cm_scaffold_751_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(21308..22213)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUX8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22366.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_751_30
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(22253..22531)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K0D8_9BACT
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
rpsS; ribosomal protein S19
Displaying items 1-30 of 46 in total

View Taxonomy