ggKbase home page

13_2_20cm_scaffold_1517

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1517_1
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..662)
DNA (660bp) protein (220aa)
type III restriction enzyme, res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=BJP_IG2102_Methanoregula_52_95
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363E13F
type III restriction enzyme, res subunit
13_2_20cm_scaffold_1517_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1044..2405)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C7897 rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_2_20cm_scaffold_1517_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2402..2740)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000362D5B7
PadR-like family transcriptional regulator Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
13_2_20cm_scaffold_1517_4

Not on your lists

3198..6143
DNA (2946bp) protein (982aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037F2EBC
Putative Serine/threonine protein kinase with TPR repeats {ECO:0000313|EMBL:CBH99615.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage meta
serine/threonin protein kinase
13_2_20cm_scaffold_1517_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(6835..7812)
DNA (978bp) protein (326aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAJ8_SPHTD
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACZ40841.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobac
13_2_20cm_scaffold_1517_6
unknown

Not on your lists

8005..8370
DNA (366bp) protein (122aa)

This feature has no annotations

13_2_20cm_scaffold_1517_7
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8239..9306)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J822_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ08450.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
putative glycosyltransferase
13_2_20cm_scaffold_1517_8
GWC1_OD1_38_17, Parcubacteria, Bacteria

Not on your lists

comp(9338..10477)
DNA (1140bp) protein (380aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58365.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
id=2649011 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
13_2_20cm_scaffold_1517_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10584..11039)
DNA (456bp) protein (152aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:ABJ88405.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ABJ88405.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Can
UDP-glucose 6-dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PL5_SOLUE
13_2_20cm_scaffold_1517_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11015..11875)
DNA (861bp) protein (287aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:CCE05600.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CCE05600.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
UDP-glucose 6-dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGL2_9BRAD
nucleotide sugar dehydrogenase
13_2_20cm_scaffold_1517_11
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11916..13037)
DNA (1122bp) protein (374aa)
Methyltransferase, FkbM family n=1 Tax=Frankia sp. QA3 RepID=I9KBX5_9ACTO
FkbM family methyltransferase {ECO:0000313|EMBL:KIZ19187.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC
FkbM family methyltransferase
13_2_20cm_scaffold_1517_12

Not on your lists

comp(13034..14578)
DNA (1545bp) protein (515aa)
Glycosyl transferase, family 2 n=1 Tax=uncultured bacterium RepID=C5JAF9_9BACT rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CAX83752.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosyl transferase family protein
13_2_20cm_scaffold_1517_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14588..16366)
DNA (1779bp) protein (593aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BJ4_SOLUE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ81572.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_1517_14
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(16370..17170)
DNA (801bp) protein (267aa)
type 12 methyltransferase Tax=RBG_16_RIF03_38_10_curated
Methyltransferase type 12 id=2648970 bin=GWC1_OD1_38_17 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
type 12 methyltransferase
13_2_20cm_scaffold_1517_15
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17171..18976)
DNA (1806bp) protein (602aa)
Glycosyl transferase-like protein id=2138847 bin=GWD2_Desulfuromonadales_54_10 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Desulfuromonadales_54_10_curated
hypothetical protein
13_2_20cm_scaffold_1517_16
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(19040..19993)
DNA (954bp) protein (318aa)
Glycosyl transferase, family 2 n=1 Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1VAD6_DESVV
Fe-S oxidoreductase-like protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
glycosyl transferase family protein
13_2_20cm_scaffold_1517_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20175..21689
DNA (1515bp) protein (505aa)
Organic solvent tolerance protein OstA-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVD5_KORVE
organic solvent tolerance protein OstA-like protein
Organic solvent tolerance protein OstA-like protein {ECO:0000313|EMBL:ABF39165.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
13_2_20cm_scaffold_1517_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21701..22606
DNA (906bp) protein (302aa)
Organic solvent tolerance protein OstA-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVD5_KORVE
organic solvent tolerance protein OstA-like protein
Organic solvent tolerance protein OstA-like protein {ECO:0000313|EMBL:ABF39165.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
13_2_20cm_scaffold_1517_19
GWB1_OP11_41_15, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(22652..23425)
DNA (774bp) protein (258aa)
UPI0003D7A4AC related cluster n=2 Tax=unclassified Aminicenantes RepID=UPI0003D7A4AC
ABC transporter related protein {ECO:0000313|EMBL:KKR93696.1}; TaxID=1618428 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_15.;"
Teichoic acid export ABC transporter family protein
13_2_20cm_scaffold_1517_20
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23435..24211)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4L061_9DELT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samp
O-antigen export system permease protein rfbA
13_2_20cm_scaffold_1517_21
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

24341..25315
DNA (975bp) protein (325aa)
Glycosyl transferase, family 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PS1_SOLUE
glycosyl transferase family protein; K07011 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
glycosyl transferase family protein
13_2_20cm_scaffold_1517_22
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

25352..26461
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNE6_DESK7
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_1517_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26464..27471)
DNA (1008bp) protein (336aa)
Glycosyl transferase, family 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PS0_SOLUE rbh
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABJ88350.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter
13_2_20cm_scaffold_1517_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(27517..28950)
DNA (1434bp) protein (478aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q71_SOLUE rbh
13_2_20cm_scaffold_1517_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

29002..30600
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O09 RepID=UPI00037A64D0
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:CDM66601.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogen
Displaying 25 items

View Taxonomy