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13_2_20cm_scaffold_229

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_229_1
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3..605)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E56AF
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEU38788.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella
13_2_20cm_scaffold_229_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1072..1851)
DNA (780bp) protein (260aa)
Transcriptional regulator, LytR/AlgR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ6_KORVE
LytR/AlgR family transcriptional regulator
Transcriptional regulator, LytR/AlgR family {ECO:0000313|EMBL:ABF40004.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
13_2_20cm_scaffold_229_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(1883..2791)
DNA (909bp) protein (303aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
atoB; acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase id=1250362 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_2_20cm_scaffold_229_4
unknown

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3439..4080
DNA (642bp) protein (214aa)

This feature has no annotations

13_2_20cm_scaffold_229_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4376..5125
DNA (750bp) protein (250aa)
RNA methyltransferase TrmH, group 3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ4_KORVE rbh
RNA methyltransferase TrmH, group 3
RNA methyltransferase TrmH, group 3 {ECO:0000313|EMBL:ABF40006.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_2_20cm_scaffold_229_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5122..6837
DNA (1716bp) protein (572aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ3_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40007.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_229_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6882..8309
DNA (1428bp) protein (476aa)
Beta-lactamase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJR0_KORVE rbh
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:ABF42890.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_2_20cm_scaffold_229_8
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8318..8800
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FLD9_PAEMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI43507.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain
13_2_20cm_scaffold_229_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8829..9875)
DNA (1047bp) protein (349aa)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteria
Anthranilate phosphoribosyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TRPD_KORVE rbh
anthranilate phosphoribosyltransferase
13_2_20cm_scaffold_229_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10322..11497
DNA (1176bp) protein (392aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=SUCC_KORVE rbh
sucC; succinyl-CoA synthetase subunit beta
13_2_20cm_scaffold_229_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11494..12378
DNA (885bp) protein (295aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJS6_KORVE
succinyl-CoA synthetase subunit alpha
13_2_20cm_scaffold_229_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12425..12850
DNA (426bp) protein (142aa)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=NDK_KORVE
nucleoside diphosphate kinase
13_2_20cm_scaffold_229_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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12903..13094
DNA (192bp) protein (64aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
4-oxalocrotonate tautomerase family enzyme n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJS8_KORVE
4-oxalocrotonate tautomerase
13_2_20cm_scaffold_229_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13107..13394)
DNA (288bp) protein (96aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT1_KORVE
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ABF42869.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
13_2_20cm_scaffold_229_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13394..14755)
DNA (1362bp) protein (454aa)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
Adenylosuccinate synthetase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=PURA_KORVE
adenylosuccinate synthetase
13_2_20cm_scaffold_229_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15029..15877
DNA (849bp) protein (283aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054
Formamidopyrimidine-DNA glycosylase / DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT4_KORVE rbh
formamidopyrimidine-DNA glycosylase
13_2_20cm_scaffold_229_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16013..17086
DNA (1074bp) protein (358aa)
Glucokinase {ECO:0000313|EMBL:ABF42865.1}; EC=2.7.1.2 {ECO:0000313|EMBL:ABF42865.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
Glucokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT5_KORVE rbh
glucokinase
13_2_20cm_scaffold_229_18
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17079..17810)
DNA (732bp) protein (244aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium
pseudouridine synthase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B2EDE2
pseudouridine synthase rsuA family protein
13_2_20cm_scaffold_229_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17851..18606)
DNA (756bp) protein (252aa)
Condensin subunit ScpB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT8_KORVE
condensin subunit ScpB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_2_20cm_scaffold_229_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18805..19668)
DNA (864bp) protein (288aa)
Condensin subunit ScpA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT9_KORVE rbh
condensin subunit ScpA
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_2_20cm_scaffold_229_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19671..20732)
DNA (1062bp) protein (354aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJU0_KORVE rbh
tryptophanyl-tRNA synthetase
13_2_20cm_scaffold_229_22
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(20732..21433)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036B43C0
peptidase M50 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
peptidase M50
13_2_20cm_scaffold_229_23
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(21504..22316)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037CF28C
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:AEU36847.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicell
13_2_20cm_scaffold_229_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

22382..22918
DNA (537bp) protein (179aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] id=14627707 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=CSP1_6_Rokubacteria
agmatinase
13_2_20cm_scaffold_229_25
Anoxybacillus flavithermus, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22915..23340
DNA (426bp) protein (142aa)
Arginase n=1 Tax=Anoxybacillus flavithermus (strain DSM 21510 / WK1) RepID=B7GFS2_ANOFW
speB; arginase
Arginase {ECO:0000313|EMBL:ACJ32602.1}; TaxID=491915 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus flavithermus (strain DSM 21510 / WK1).;"
13_2_20cm_scaffold_229_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23350..24645
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI00037D2B11
rocC; amino acid permease rocC Tax=RBG_16_Gemmatimonadetes_66_8_curated
amino acid permease-associated region
13_2_20cm_scaffold_229_27

Not on your lists

24635..26275
DNA (1641bp) protein (547aa)
N-acyl-D-amino-acid deacylase {ECO:0000313|EMBL:CBI00635.1}; EC=3.5.1.81 {ECO:0000313|EMBL:CBI00635.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mi
N-acyl-D-amino-acid deacylase n=1 Tax=mine drainage metagenome RepID=E6Q0C6_9ZZZZ
N-acyl-D-aspartate/D-glutamate deacylase
13_2_20cm_scaffold_229_28
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26419..26937)
DNA (519bp) protein (173aa)
transposase IS4 family protein; K07481 transposase, IS5 family Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
transposase, IS4 id=12498613 bin=THIO_MID species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transposase IS4
Displaying 28 items

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