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13_2_20cm_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_290_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

2..1246
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000379F146
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
extracellular solute-binding protein family 1
13_2_20cm_scaffold_290_2
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

1246..2181
DNA (936bp) protein (312aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LR66_TEPAE
ABC-type transporter, integral membrane subunit Tax=RBG_16_NC10_65_8_curated
ABC-type transporter, integral membrane subunit
13_2_20cm_scaffold_290_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

2178..3035
DNA (858bp) protein (286aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LR65_TEPAE
ABC-type transporter, integral membrane subunit Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter permease
13_2_20cm_scaffold_290_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3032..4213)
DNA (1182bp) protein (394aa)
major facilitator superfamily MFS 1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Fosmidomycin resistance protein id=4947488 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major Facilitator Superfamily protein
13_2_20cm_scaffold_290_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4350..4838
DNA (489bp) protein (163aa)
Transcriptional regulator, MarR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IME8_KORVE
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABF41952.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_290_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4835..5419
DNA (585bp) protein (195aa)
OmpA/MotB domain protein id=14626729 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
OmpA/MotB domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
peptidoglycan-associated lipoprotein
13_2_20cm_scaffold_290_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5492..6118
DNA (627bp) protein (209aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase id=4947487 bin=GWA2_Methylomirabilis_73_35 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_290_8
unknown

Not on your lists

6115..6510
DNA (396bp) protein (132aa)

This feature has no annotations

13_2_20cm_scaffold_290_9
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6551..7816)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00036B715E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG74248.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
13_2_20cm_scaffold_290_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8178..8654
DNA (477bp) protein (159aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=GWC2_Rokubacteria_70_16_curated
(2Fe-2S)-binding domain protein id=3729521 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_2_20cm_scaffold_290_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8651..11098
DNA (2448bp) protein (816aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
4-hydroxybenzoyl-CoA reductase subunit alpha id=4915860 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_2_20cm_scaffold_290_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11211..12224
DNA (1014bp) protein (338aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein id=14627887 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_2_20cm_scaffold_290_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12221..12769
DNA (549bp) protein (183aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cupin 2 domain-containing protein id=4915863 bin=GWC2_Methylomirabilis_70_16 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
XRE family transcriptional regulator
13_2_20cm_scaffold_290_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12781..14442
DNA (1662bp) protein (554aa)
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] Tax=CSP1_6_Rokubacteria
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase id=4915864 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_290_15
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

14442..15872
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003700BBD
benzoyl-CoA oxygenase subunit B Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
boxB; benzoyl-CoA oxygenase component B
13_2_20cm_scaffold_290_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15875..16330
DNA (456bp) protein (152aa)
enodribonuclease L-PSP n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262650F
endoribonuclease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
endoribonuclease
13_2_20cm_scaffold_290_17
unknown

Not on your lists

comp(16511..16900)
DNA (390bp) protein (130aa)

This feature has no annotations

13_2_20cm_scaffold_290_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16978..18531
DNA (1554bp) protein (518aa)
Putative benzoate-CoA ligase BzlA (Fragment) n=1 Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWP9_9FIRM
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_73_35_curated
benzoate-CoA ligase family
13_2_20cm_scaffold_290_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18531..19805
DNA (1275bp) protein (425aa)
paaK; phenylacetate-CoA ligase Tax=GWA2_Rokubacteria_73_35_curated
Phenylacetate-CoA ligase id=4124058 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phenylacetate-CoA ligase
13_2_20cm_scaffold_290_20
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19868..20914
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7TZP8_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFA91000.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_2_20cm_scaffold_290_21
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20905..21222)
DNA (318bp) protein (106aa)
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AYL2_RHOBT
cupin
Phosphoribosylaminoimidazole carboxylase ATPase subunit {ECO:0000313|EMBL:EGF25209.1}; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellu
13_2_20cm_scaffold_290_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21314..21859
DNA (546bp) protein (182aa)
RNA polymerase sigma factor, sigma-70 family protein id=3960152 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_scaffold_290_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21865..22650
DNA (786bp) protein (262aa)
Putative uncharacterized protein id=3960150 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane anti-sigma factor Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_290_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22657..23214)
DNA (558bp) protein (186aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase id=4492889 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_2_20cm_scaffold_290_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

23249..23806
DNA (558bp) protein (186aa)
id=14626860 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_2_20cm_scaffold_290_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23852..24106
DNA (255bp) protein (85aa)
hypothetical protein; K03154 sulfur carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Thiamine biosynthesis protein ThiS id=4492888 bin=GWA2_Methylomirabilis_73_35 species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiamine biosynthesis protein ThiS
13_2_20cm_scaffold_290_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24103..25005
DNA (903bp) protein (301aa)
phosphoadenosine phosphosulfate reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phosphoadenosine phosphosulfate reductase id=4097825 bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphoadenosine phosphosulfate reductase
13_2_20cm_scaffold_290_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25052..25894
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XY26_SORCE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_290_29
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

26057..26584
DNA (528bp) protein (176aa)
CBS domain containing protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TUJ1_BACCJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
CBS domain containing protein
13_2_20cm_scaffold_290_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26600..26962)
DNA (363bp) protein (121aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TraR/DksA family id=2811598 bin=GWC2_Methylomirabilis_70_24 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Displaying items 1-30 of 36 in total

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