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13_2_20cm_scaffold_8035

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_8035_1
unknown

Not on your lists

1..69
DNA (69bp) protein (23aa)

This feature has no annotations

13_2_20cm_scaffold_8035_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

69..293
DNA (225bp) protein (75aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4998222 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_8035_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

290..1621
DNA (1332bp) protein (444aa)
amino acid transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Amino acid/polyamine/organocation transporter, APC superfamily id=4998223 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid transporter
13_2_20cm_scaffold_8035_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1618..2592
DNA (975bp) protein (325aa)
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
magnesium and cobalt transport protein CorA; K03284 magnesium transporter id=14626346 bin=bin7_NC10_sister species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
magnesium and cobalt transport protein CorA
13_2_20cm_scaffold_8035_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2749..3102)
DNA (354bp) protein (118aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4998224 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_8035_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3133..3924)
DNA (792bp) protein (264aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4998225 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_8035_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4057..4686
DNA (630bp) protein (210aa)
organic solvent tolerance ABC transporter, periplasmic substrate-binding protein; K07323 putative toluene tolerance protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Organic solvent tolerance ABC transporter, periplasmic substrate-binding protein id=4998226 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
organic solvent tolerance ABC transporter substrate-binding protein
13_2_20cm_scaffold_8035_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4718..6238
DNA (1521bp) protein (507aa)
sodium solute transporter superfamily protein id=14627648 bin=bin7_NC10_sister species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
sodium solute transporter superfamily protein Tax=CSP1_6_Rokubacteria
sodium solute transporter superfamily protein
13_2_20cm_scaffold_8035_9
unknown

Not on your lists

comp(6219..6392)
DNA (174bp) protein (58aa)

This feature has no annotations

13_2_20cm_scaffold_8035_10
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6404..7303)
DNA (900bp) protein (300aa)
fatty-acid--CoA ligase (EC:6.2.1.-)
Acyl-CoA synthetase n=2 Tax=Saccharopolyspora erythraea RepID=T2RVA6_SACER
Acyl-CoA synthetase {ECO:0000313|EMBL:EQD84331.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
13_2_20cm_scaffold_8035_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7594..9072)
DNA (1479bp) protein (493aa)
beta-N-acetylglucosaminidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl hydrolase domain protein id=4788498 bin=GWC2_Methylomirabilis_70_16 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-N-acetylhexosaminidase
13_2_20cm_scaffold_8035_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9338..9874
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003764836
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_2_20cm_scaffold_8035_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9996..10349
DNA (354bp) protein (118aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3877521 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_8035_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10354..11541)
DNA (1188bp) protein (396aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterised conserved protein UCP016719 id=4485812 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_8035_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11573..12556
DNA (984bp) protein (328aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=GWA2_Rokubacteria_73_35_curated
N-acetylmuramic acid 6-phosphate etherase id=3431007 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_8035_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12465..13103)
DNA (639bp) protein (213aa)
MOSC domain containing protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QK31_CATAD
MOSC domain-containing protein; K07140 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
MOSC domain-containing protein
13_2_20cm_scaffold_8035_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13146..14243)
DNA (1098bp) protein (366aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=3431010 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium CSLF43 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_8035_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14249..14482
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
13_2_20cm_scaffold_8035_19
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14489..14713
DNA (225bp) protein (75aa)
Tax=RBG_16_Betaproteobacteria_66_20_curated
13_2_20cm_scaffold_8035_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14858..15655
DNA (798bp) protein (266aa)
Uncharacterized protein id=3068161 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas sp. GM50 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR Tax=GWC2_Rokubacteria_70_16_curated
dehydrogenase
13_2_20cm_scaffold_8035_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15748..16926
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase domain protein id=4485927 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_scaffold_8035_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16929..17711
DNA (783bp) protein (261aa)
enoyl-CoA hydratase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Enoyl-CoA hydratase/isomerase family protein id=3068152 bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
enoyl-CoA hydratase
13_2_20cm_scaffold_8035_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18286..18864)
DNA (579bp) protein (193aa)
ThiJ/PfpI domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ThiJ/PfpI domain-containing protein id=14625351 bin=bin7_NC10_sister species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ThiJ/PfpI domain-containing protein
13_2_20cm_scaffold_8035_24
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18861..19556)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCE3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89960.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_2_20cm_scaffold_8035_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19558..20082)
DNA (525bp) protein (175aa)
siderophore-binding protein id=4485938 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
carbonic anhydrase Tax=GWA2_Rokubacteria_70_23_curated
carbonic anhydrase
13_2_20cm_scaffold_8035_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20153..21178
DNA (1026bp) protein (342aa)
Chalcone and stilbene synthase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chalcone and stilbene synthase domain protein id=14627397 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Chalcone and stilbene synthase domain protein
13_2_20cm_scaffold_8035_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21188..21856
DNA (669bp) protein (223aa)
SAM-dependent methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type 11 methyltransferase id=14627396 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
methyltransferase type 11
13_2_20cm_scaffold_8035_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21853..22602
DNA (750bp) protein (250aa)
Electron transfer oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Electron transfer oxidoreductase id=4485942 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Electron transfer oxidoreductase
Displaying 28 items

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