name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_2_20cm_scaffold_2371_1
CSP1_5_NC10, NC10, Bacteria
|
Not on your lists |
comp(220..678)
|
anti-ECFsigma factor, ChrR id=14429568 bin=bin3_NC10 species=Afipia birgiae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
anti-ECFsigma factor, ChrR Tax=CSP1_5_NC10
Germin-like protein subfamily 2 member 2 Flags: Precursor
|
|
13_2_20cm_scaffold_2371_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(720..1100)
|
hypothetical protein; K07068 Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3677765 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nucleic-acid-binding protein
|
|
13_2_20cm_scaffold_2371_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(1093..2247)
|
acetyl-CoA C-acyltransferase 8 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Propanoyl-CoA C-acyltransferase id=2338963 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetyl-CoA C-acyltransferase 8
|
|
13_2_20cm_scaffold_2371_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
2269..3264
|
Predicted dehydrogenases and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2338962 bin=GWA2_Methylomirabilis_73_35 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
Oxidoreductase
|
|
13_2_20cm_scaffold_2371_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
4194..4649
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=2338961 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_2_20cm_scaffold_2371_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(4650..5018)
|
Response regulator receiver domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ08_SYNAS
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
response regulator receiver domain-containing protein
|
|
13_2_20cm_scaffold_2371_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(5043..6095)
|
response regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
response regulator receiver modulated metal dependent phosphohydrolase id=14626650 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator
|
|
13_2_20cm_scaffold_2371_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(6067..7053)
|
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Diguanylate cyclase id=2338959 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase
|
|
13_2_20cm_scaffold_2371_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
7117..7353
|
SirA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
SirA family protein id=2338958 bin=GWA2_Methylomirabilis_73_35 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SirA family protein
|
|
13_2_20cm_scaffold_2371_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
7313..8521
|
class V aminotransferase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aminotransferase class V id=2338873 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysteine desulfurase
|
|
13_2_20cm_scaffold_2371_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
8523..9284
|
Hydrolase, haloacid dehalogenase-like family id=2338871 bin=GWA2_Methylomirabilis_73_35 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
haloacid dehalogenase domain-containing protein hydrolase Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
|
|
13_2_20cm_scaffold_2371_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
9288..9737
|
hypothetical protein id=2338870 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
13_2_20cm_scaffold_2371_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9809..10450)
|
NADPH-dependent F420 reductase; K06988 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADPH-dependent F420 reductase id=2338864 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADPH-dependent F420 reductase
|
|
13_2_20cm_scaffold_2371_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(10460..11227)
|
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] id=14628085 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
rbh
F420-dependent oxidoreductase
|
|
13_2_20cm_scaffold_2371_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(11224..11895)
|
2-phospho-L-lactate guanylyltransferase CofC; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68] Tax=GWA2_Rokubacteria_73_35_curated
2-phospho-L-lactate guanylyltransferase id=2615049 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-phospho-L-lactate guanylyltransferase CofC
|
|
13_2_20cm_scaffold_2371_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(11892..12812)
|
2-phospho-L-lactate transferase; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-phospho-L-lactate transferase id=4348880 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LPPG:FO 2-phospho-L-lactate transferase
|
|
13_2_20cm_scaffold_2371_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(12814..13377)
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=2338861 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_2_20cm_scaffold_2371_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(13364..13651)
|
hupB; transcriptional dual regulator HU-beta; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional dual regulator HU-beta id=3762996 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hupB; transcriptional dual regulator HU-beta
|
|
13_2_20cm_scaffold_2371_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(13721..14986)
|
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-)
FO synthase subunit 2 id=3762998 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
|
|
13_2_20cm_scaffold_2371_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(14964..16052)
|
cofG; FO synthase subunit 1; K11779 FO synthase [EC:2.5.1.-] Tax=GWA2_Rokubacteria_73_35_curated
FO synthase subunit 1 id=3763000 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cofG; FO synthase subunit 1
|
|
13_2_20cm_scaffold_2371_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(16049..17062)
|
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases id=3763002 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_06I16 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
luciferase-like protein Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like protein
|
|
13_2_20cm_scaffold_2371_22
unknown
|
Not on your lists |
17210..17431
|
This feature has no annotations |
|
13_2_20cm_scaffold_2371_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
17522..18955
|
putative two-component histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidine kinase id=1767179 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane sensor signal transduction histidine kinase
|
|
13_2_20cm_scaffold_2371_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
18952..19296
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=1767177 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_2_20cm_scaffold_2371_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
19310..20800
|
signal transduction histidine kinase NtrB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Signal transduction histidine kinase, nitrogen specific, NtrB id=1767175 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor signal transduction histidine kinase
|
|
13_2_20cm_scaffold_2371_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
21500..22138
|
Two component, sigma54 specific, transcriptional regulator, Fis family id=1767173 bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=GWA2_Rokubacteria_73_35_curated
acetoacetate metabolism regulatory protein AtoC
|
|
13_2_20cm_scaffold_2371_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
22314..22652
|
nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Nitrogen regulatory protein P-II 1 id=1767171 bin=GWA2_Methylomirabilis_73_35 species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrogen regulatory protein PII
|
|
13_2_20cm_scaffold_2371_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
22674..24065
|
amtB; ammonium transport protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ammonium transport protein (Amt family) id=4828258 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amtB; ammonium transport protein
|
|
13_2_20cm_scaffold_2371_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
24163..25587
|
glnA1; glutamine synthetase (EC:6.3.1.2)
glnA; glutamine synthetase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glnA; glutamine synthetase id=14625787 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rbh
|
|
13_2_20cm_scaffold_2371_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(25825..26925)
|
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035C8134
putative transposase for insertion sequence NGRIS-13h Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transposase for insertion sequence NGRIS-13h
|