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13_2_20cm_scaffold_6042

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6042_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3..779
DNA (777bp) protein (259aa)
MerR family transcriptional regulator n=1 Tax=Mycobacterium yongonense 05-1390 RepID=S4Z361_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:ETX04304.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
MerR family transcriptional regulator
13_2_20cm_scaffold_6042_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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927..1784
DNA (858bp) protein (286aa)
Lytic transglycosylase, catalytic id=3773019 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Lytic transglycosylase, catalytic Tax=GWC2_Rokubacteria_70_16_curated
peptidase M23
13_2_20cm_scaffold_6042_3
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

1803..3038
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW3_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
13_2_20cm_scaffold_6042_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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3035..3805
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW4_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_2_20cm_scaffold_6042_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3847..5250
DNA (1404bp) protein (468aa)
putative UDP-N-acetylmuramate-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RBG_16_RIF_WS3X_71_46_curated
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0C4_9BACT id=5223295 bin=16ft_combo_ws3_JS1 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
hypothetical protein
13_2_20cm_scaffold_6042_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5274..6377)
DNA (1104bp) protein (368aa)
hypothetical protein id=2395057 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_6042_7
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(6471..7199)
DNA (729bp) protein (243aa)
Uncharacterized proteins, LmbE homolog id=4306916 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative deacetylase Tax=RBG_16_Chloroflexi_64_43_curated
hypothetical protein
13_2_20cm_scaffold_6042_8
unknown

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comp(7238..7444)
DNA (207bp) protein (69aa)

This feature has no annotations

13_2_20cm_scaffold_6042_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7441..8403)
DNA (963bp) protein (321aa)
Putative uncharacterized protein id=3995087 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_6042_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8411..9055)
DNA (645bp) protein (215aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] Tax=GWA2_Rokubacteria_73_35_curated
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase id=4854974 bin=GWC2_Methylomirabilis_70_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_6042_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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9111..10082
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XUF2_PSEFL
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_2_20cm_scaffold_6042_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(10030..10425)
DNA (396bp) protein (132aa)
Protein PilT id=4362593 bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pilT2; protein PilT Tax=GWA2_Rokubacteria_70_23_curated
twitching motility protein PilT
13_2_20cm_scaffold_6042_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10422..10730)
DNA (309bp) protein (103aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Gsl3799 protein id=4279013 bin=GWA2_Methylomirabilis_73_35 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
prevent-host-death protein
13_2_20cm_scaffold_6042_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10909..11151
DNA (243bp) protein (81aa)
Putative uncharacterized protein id=3778011 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_6042_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11148..11558
DNA (411bp) protein (137aa)
Putative uncharacterized protein id=3830916 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_6042_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11539..11880)
DNA (342bp) protein (114aa)
hypothetical protein id=14626696 bin=bin7_NC10_sister species=Methanobacterium sp. MB1 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
Displaying 16 items

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